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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_2088 and Dsui_2089 are separated by 102 nucleotides
Dsui_2089 and Dsui_2090 are separated by 133 nucleotides
Dsui_2090 and Dsui_2091 overlap by 4 nucleotides
Dsui_2091 and Dsui_2092 overlap by 37 nucleotides
Dsui_2088: Dsui_2088 - cytochrome c, at 2,210,365 to 2,211,318
_2088
Dsui_2089: Dsui_2089 - dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein, at 2,211,421 to 2,212,176
_2089
Dsui_2090: Dsui_2090 - transcriptional regulator, at 2,212,310 to 2,213,251
_2090
Dsui_2091: Dsui_2091 - hypothetical protein, at 2,213,248 to 2,213,385
_2091
Dsui_2092: Dsui_2092 - hypothetical protein, at 2,213,349 to 2,214,350
_2092
Group
Condition
Dsui
_2088
Dsui
_2089
Dsui
_2090
Dsui
_2091
Dsui
_2092
stress
ALP with Chloride 75 mM
N.D.
N.D.
-1.4
N.D.
N.D.
stress
ALP with Dimethyl Sulfoxide 2 vol%
N.D.
N.D.
-1.3
N.D.
N.D.
stress
ALP with Fusidic 0.01 mg/ml
N.D.
N.D.
-1.3
N.D.
N.D.
carbon source
pyruvate (C)
N.D.
N.D.
-1.2
N.D.
N.D.
stress
ALP with perchlorate 12 mM
N.D.
N.D.
-1.1
N.D.
N.D.
stress
ALP with Bacitracin 0.2 mg/ml
N.D.
N.D.
-1.1
N.D.
N.D.
carbon source
R2A with sodium pyruvate
N.D.
N.D.
-1.0
N.D.
N.D.
carbon source
propionate (C)
N.D.
N.D.
-1.0
N.D.
N.D.
stress
ALP with perchlorate 6 mM
N.D.
N.D.
-0.9
N.D.
N.D.
stress
ALP with nitrite 0.3 mM
N.D.
N.D.
-0.8
N.D.
N.D.
stress
ALP with Zinc 1 mM
N.D.
N.D.
-0.7
N.D.
N.D.
carbon source
defined media with 30 mM sodium lactate
N.D.
N.D.
-0.7
N.D.
N.D.
stress
ALP with Zinc 2 mM
N.D.
N.D.
-0.6
N.D.
N.D.
carbon source
L-Lactate (C)
N.D.
N.D.
-0.6
N.D.
N.D.
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
N.D.
N.D.
-0.6
N.D.
N.D.
stress
ALP with Cisplatin 0.0009 mg/ml
N.D.
N.D.
-0.5
N.D.
N.D.
stress
ALP with Cobalt chloride 0.25 mM
N.D.
N.D.
-0.5
N.D.
N.D.
carbon source
D,L-Lactate (C)
N.D.
N.D.
-0.5
N.D.
N.D.
stress
ALP with Cobalt chloride 0.2 mM
N.D.
N.D.
+0.5
N.D.
N.D.
carbon source
defined media with 40 mM sodium acetate
N.D.
N.D.
+0.6
N.D.
N.D.
stress
rich media with sodium chlorite 0.16 mM
N.D.
N.D.
+0.6
N.D.
N.D.
carbon source
defined media with 40 mM sodium acetate
N.D.
N.D.
+0.7
N.D.
N.D.
stress
ALP with Nickel (II) chloride 2.5 mM
N.D.
N.D.
+0.7
N.D.
N.D.
stress
ALP with Fusidic 0.007 mg/ml
N.D.
N.D.
+0.8
N.D.
N.D.
stress
ALP with nitrate 75 mM
N.D.
N.D.
+0.8
N.D.
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
N.D.
+0.8
N.D.
N.D.
carbon source
a-Ketoglutaric (C)
N.D.
N.D.
+0.8
N.D.
N.D.
stress
ALP with Cisplatin 0.0008 mg/ml
N.D.
N.D.
+0.9
N.D.
N.D.
carbon source
propionate (C)
N.D.
N.D.
+1.2
N.D.
N.D.
stress
ALP with copper (II) chloride 0.6 mM
N.D.
N.D.
+2.0
N.D.
N.D.
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