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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_2054 and Dsui_2055 are separated by 194 nucleotides
Dsui_2055 and Dsui_2056 are separated by 674 nucleotides
Dsui_2056 and Dsui_2057 are separated by 498 nucleotides
Dsui_2057 and Dsui_2058 overlap by 1 nucleotides
Dsui_2054: Dsui_2054 - hypothetical protein, at 2,173,547 to 2,173,915
_2054
Dsui_2055: Dsui_2055 - methylase involved in ubiquinone/menaquinone biosynthesis, at 2,174,110 to 2,174,913
_2055
Dsui_2056: Dsui_2056 - hypothetical protein, at 2,175,588 to 2,176,142
_2056
Dsui_2057: Dsui_2057 - ABC-type branched-chain amino acid transport systems, ATPase component, at 2,176,641 to 2,177,354
_2057
Dsui_2058: Dsui_2058 - ABC-type branched-chain amino acid transport systems, ATPase component, at 2,177,354 to 2,178,136
_2058
Group
Condition
Dsui
_2054
Dsui
_2055
Dsui
_2056
Dsui
_2057
Dsui
_2058
stress
ALP with nitrite 0.15 mM
-2.6
N.D.
-0.7
+0.4
+0.3
stress
ALP with Zinc 2 mM
-2.0
N.D.
-0.6
+0.2
+0.1
stress
ALP with Cobalt chloride 0.25 mM
-1.7
N.D.
-0.5
+0.3
-0.2
stress
ALP with copper (II) chloride 0.6 mM
-1.5
N.D.
+0.4
-0.2
-0.6
stress
ALP with Thallium(I) acetate 0.002 mg/ml
-1.5
N.D.
-0.9
+0.3
+0.1
stress
ALP with Zinc 1 mM
-2.0
N.D.
-0.7
+0.4
+0.4
stress
ALP with sodium fluoride 40 mM
-1.2
N.D.
-0.8
+0.0
+0.1
stress
ALP with Thallium(I) acetate 0.003 mg/ml
-1.6
N.D.
-0.7
+0.4
+0.3
stress
ALP with Cisplatin 0.0008 mg/ml
-1.7
N.D.
-0.5
+0.4
+0.3
stress
ALP with Thallium(I) acetate 0.004 mg/ml
-1.7
N.D.
-0.9
+0.6
+0.4
stress
ALP with Cobalt chloride 0.2 mM
-1.2
N.D.
-0.5
+0.3
+0.1
stress
ALP with nitrate 50 mM
-1.4
N.D.
-0.8
+0.6
+0.5
stress
ALP with nitrite 0.3 mM
-0.4
N.D.
-0.8
+0.3
+0.3
stress
ALP with nitrite 0.45 mM
-0.6
N.D.
-0.8
+0.4
+0.4
stress
ALP with Cisplatin 0.0007 mg/ml
-0.8
N.D.
-0.2
+0.6
+0.2
stress
ALP with nitrate 75 mM
-0.6
N.D.
-0.7
+0.5
+0.5
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.2
N.D.
-0.8
+0.1
+0.6
stress
ALP with perchlorate 3 mM
-0.5
N.D.
-0.3
+0.4
+0.4
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.3
N.D.
-0.5
+0.3
+0.7
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.1
N.D.
-0.6
+0.2
+0.7
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.2
N.D.
-0.6
+0.2
+0.6
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.2
N.D.
-0.4
+0.4
+0.7
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
+0.1
N.D.
-0.6
+0.3
+0.7
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
+0.2
N.D.
-0.6
+0.6
+0.9
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
+0.5
N.D.
-0.5
+0.2
+0.8
carbon source
propionate (C)
+0.8
N.D.
+0.1
+0.4
+0.4
carbon source
a-Ketoglutaric (C)
+0.9
N.D.
+0.3
+0.2
+0.6
stress
ALP with Fusidic 0.02 mg/ml
+0.0
N.D.
+0.0
+1.1
+1.1
stress
ALP with Fusidic 0.007 mg/ml
+0.7
N.D.
-0.2
+0.8
+1.2
stress
ALP with Fusidic 0.01 mg/ml
+0.4
N.D.
-0.0
+1.1
+1.0
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