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Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_1984 and Dsui_1985 overlap by 4 nucleotides
Dsui_1985 and Dsui_1986 are separated by 28 nucleotides
Dsui_1986 and Dsui_1987 are separated by 24 nucleotides
Dsui_1987 and Dsui_1988 are separated by 105 nucleotides
Dsui_1984: Dsui_1984 - thioredoxin-dependent adenylylsulfate APS reductase, at 2,093,708 to 2,094,430
_1984
Dsui_1985: Dsui_1985 - hypothetical protein, at 2,094,427 to 2,094,945
_1985
Dsui_1986: Dsui_1986 - sulfite reductase, beta subunit (hemoprotein), at 2,094,974 to 2,096,650
_1986
Dsui_1987: Dsui_1987 - putative permease, at 2,096,675 to 2,097,448
_1987
Dsui_1988: Dsui_1988 - transcriptional regulator, at 2,097,554 to 2,098,528
_1988
Group
Condition
Dsui
_1984
Dsui
_1985
Dsui
_1986
Dsui
_1987
Dsui
_1988
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
N.D.
N.D.
-0.6
N.D.
ALP with 3 all (C)s
N.D.
N.D.
N.D.
-0.6
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
N.D.
N.D.
-0.6
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
+0.6
N.D.
stress
ALP with Thallium(I) acetate 0.002 mg/ml
N.D.
N.D.
N.D.
+0.6
N.D.
stress
ALP with Zinc 1 mM
N.D.
N.D.
N.D.
+0.6
N.D.
stress
ALP with Dimethyl Sulfoxide 2 vol%
N.D.
N.D.
N.D.
+0.6
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
+0.6
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
+0.6
N.D.
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
+0.6
N.D.
stress
ALP with Bacitracin 0.2 mg/ml
N.D.
N.D.
N.D.
+0.6
N.D.
stress
ALP with sodium fluoride 40 mM
N.D.
N.D.
N.D.
+0.7
N.D.
stress
ALP with Zinc 2 mM
N.D.
N.D.
N.D.
+0.7
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
+0.7
N.D.
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
+0.7
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
+0.7
N.D.
carbon source
propionate (C)
N.D.
N.D.
N.D.
+0.7
N.D.
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
N.D.
N.D.
N.D.
+0.7
N.D.
stress
ALP with Thallium(I) acetate 0.004 mg/ml
N.D.
N.D.
N.D.
+0.7
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
+0.8
N.D.
stress
ALP with Fusidic 0.007 mg/ml
N.D.
N.D.
N.D.
+0.8
N.D.
stress
ALP with perchlorate 3 mM
N.D.
N.D.
N.D.
+0.9
N.D.
stress
ALP with Fusidic 0.02 mg/ml
N.D.
N.D.
N.D.
+0.9
N.D.
stress
ALP with perchlorate 12 mM
N.D.
N.D.
N.D.
+1.0
N.D.
stress
ALP with Fusidic 0.01 mg/ml
N.D.
N.D.
N.D.
+1.0
N.D.
stress
ALP with perchlorate 6 mM
N.D.
N.D.
N.D.
+1.0
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
N.D.
N.D.
+1.8
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
N.D.
N.D.
+1.8
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
N.D.
N.D.
+1.9
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
N.D.
N.D.
+2.0
N.D.
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