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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_1931 and Dsui_1932 are separated by 166 nucleotides
Dsui_1932 and Dsui_1933 are separated by 487 nucleotides
Dsui_1933 and Dsui_1934 overlap by 8 nucleotides
Dsui_1934 and Dsui_1935 are separated by 79 nucleotides
Dsui_1931: Dsui_1931 - transcriptional regulator, at 2,041,315 to 2,041,821
_1931
Dsui_1932: Dsui_1932 - transcriptional regulator, at 2,041,988 to 2,042,491
_1932
Dsui_1933: Dsui_1933 - 2-phosphoglycolate phosphatase, at 2,042,979 to 2,043,638
_1933
Dsui_1934: Dsui_1934 - ubiquinone biosynthesis O-methyltransferase, at 2,043,631 to 2,044,329
_1934
Dsui_1935: Dsui_1935 - outer membrane protein/peptidoglycan-associated (lipo)protein, at 2,044,409 to 2,045,047
_1935
Group
Condition
Dsui
_1931
Dsui
_1932
Dsui
_1933
Dsui
_1934
Dsui
_1935
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-2.7
-2.9
+0.1
N.D.
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-3.0
-2.5
+0.0
N.D.
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-1.8
-2.4
-0.0
N.D.
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-2.2
-1.8
+0.1
N.D.
N.D.
carbon source
L-Lactate (C)
-2.6
-1.1
+0.3
N.D.
N.D.
stress
ALP with Fusidic 0.02 mg/ml
-1.9
-1.3
+0.4
N.D.
N.D.
carbon source
a-Ketoglutaric (C)
-1.4
-1.2
-0.2
N.D.
N.D.
anaerobic
Anaero. lactate (C), nitrate electron acceptor
-1.2
-1.5
+0.1
N.D.
N.D.
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
-1.0
-1.4
+0.1
N.D.
N.D.
carbon source
D,L-Lactate (C)
-1.0
-1.4
+0.2
N.D.
N.D.
stress
ALP with perchlorate 12 mM
-1.3
-1.1
+0.3
N.D.
N.D.
stress
ALP with Chloride 75 mM
-1.5
-0.8
+0.2
N.D.
N.D.
carbon source
D-Lactate (C)
-1.6
-0.7
+0.4
N.D.
N.D.
stress
ALP with perchlorate 6 mM
-2.0
-0.2
+0.2
N.D.
N.D.
stress
ALP with Thallium(I) acetate 0.002 mg/ml
-2.0
+0.3
-0.0
N.D.
N.D.
carbon source
L-Lactate (C)
-0.9
-1.2
+0.4
N.D.
N.D.
stress
ALP with Dimethyl Sulfoxide 2 vol%
-0.7
-1.3
+0.4
N.D.
N.D.
stress
ALP with Zinc 2 mM
-1.8
+0.6
-0.2
N.D.
N.D.
stress
ALP with Thallium(I) acetate 0.004 mg/ml
-1.8
+0.6
+0.1
N.D.
N.D.
alp richb
ALP
-2.3
+1.1
+0.2
N.D.
N.D.
stress
ALP with nitrate 50 mM
-1.7
+0.6
+0.2
N.D.
N.D.
stress
ALP with nitrate 75 mM
-1.9
+0.7
+0.4
N.D.
N.D.
stress
ALP with Zinc 1 mM
-1.9
+0.9
+0.2
N.D.
N.D.
stress
ALP with Cobalt chloride 0.2 mM
-2.2
+1.4
+0.1
N.D.
N.D.
stress
ALP with Cobalt chloride 0.25 mM
-1.6
+0.8
+0.1
N.D.
N.D.
stress
ALP with nitrite 0.3 mM
-1.6
+0.7
+0.3
N.D.
N.D.
stress
ALP with sodium fluoride 30 mM
-1.4
+1.2
+0.1
N.D.
N.D.
stress
ALP with Cisplatin 0.0009 mg/ml
-0.9
+1.2
+0.2
N.D.
N.D.
stress
ALP with copper (II) chloride 0.6 mM
-0.4
+1.7
-0.8
N.D.
N.D.
stress
ALP with Cisplatin 0.0008 mg/ml
-0.6
+1.6
-0.2
N.D.
N.D.
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