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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_1884 and Dsui_1885 are separated by 13 nucleotides
Dsui_1885 and Dsui_1886 overlap by 8 nucleotides
Dsui_1886 and Dsui_1887 overlap by 4 nucleotides
Dsui_1887 and Dsui_1888 overlap by 17 nucleotides
Dsui_1884: Dsui_1884 - histidine kinase, at 1,982,664 to 1,983,827
_1884
Dsui_1885: Dsui_1885 - response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 1,983,841 to 1,984,383
_1885
Dsui_1886: Dsui_1886 - response regulator containing a CheY-like receiver domain and an HD-GYP domain, at 1,984,376 to 1,985,689
_1886
Dsui_1887: Dsui_1887 - PAS domain S-box, at 1,985,686 to 1,987,896
_1887
Dsui_1888: Dsui_1888 - putative domain HDIG-containing protein, at 1,987,880 to 1,988,743
_1888
Group
Condition
Dsui
_1884
Dsui
_1885
Dsui
_1886
Dsui
_1887
Dsui
_1888
carbon source
D,L-Lactate (C)
-3.2
-0.6
-0.0
-0.9
-1.8
stress
ALP with Chloride 75 mM
-2.9
+0.0
-0.4
-1.0
-2.0
carbon source
D-Lactate (C)
-2.9
-0.7
-0.3
-0.7
-1.6
stress
ALP with perchlorate 6 mM
-2.4
-0.3
-0.1
-1.2
-2.1
carbon source
pyruvate (C)
-3.1
+0.3
-0.6
-0.8
-1.8
carbon source
L-Lactate (C)
-3.1
-0.3
+0.2
-0.8
-1.7
carbon source
L-Lactate (C)
-2.3
-0.4
-0.3
-0.8
-1.7
carbon source
D-Lactate (C)
-2.5
-0.6
+0.2
-0.7
-1.7
stress
ALP with nitrite 0.15 mM
-2.0
-0.1
-0.9
-0.4
-1.9
stress
ALP with Thallium(I) acetate 0.003 mg/ml
-2.2
-0.5
-0.6
-0.3
-1.8
stress
ALP with perchlorate 3 mM
-2.0
+0.1
-0.2
-1.1
-2.1
carbon source
D,L-Lactate (C)
-2.3
-0.0
-0.2
-0.6
-1.8
stress
ALP with sodium fluoride 40 mM
-1.8
-0.7
-0.3
-0.4
-1.8
stress
ALP with Zinc 2 mM
-2.2
+0.0
-0.9
-0.1
-1.7
carbon source
a-Ketoglutaric (C)
-2.8
-0.5
+0.1
-0.6
-1.0
stress
ALP with Thallium(I) acetate 0.004 mg/ml
-2.0
+0.3
-0.6
-0.5
-1.9
stress
ALP with nitrite 0.45 mM
-0.9
-0.2
-1.2
-0.4
-1.9
stress
ALP with Cisplatin 0.0008 mg/ml
-1.7
-0.5
-0.7
-0.1
-1.6
stress
ALP with Nickel (II) chloride 1.5 mM
-1.4
-0.5
-1.0
-0.2
-1.5
carbon source
pyruvate (C)
-1.8
-1.0
+0.3
-0.9
-1.1
stress
ALP with perchlorate 12 mM
-2.1
+0.2
+0.2
-1.2
-1.6
stress
ALP with Fusidic 0.01 mg/ml
-1.2
-1.0
+0.5
-0.8
-1.8
stress
ALP with Dimethyl Sulfoxide 2 vol%
-1.2
-0.0
-0.3
-0.9
-1.8
stress
ALP with Cobalt chloride 0.2 mM
-1.4
-0.5
-0.3
-0.3
-1.7
stress
ALP with Fusidic 0.02 mg/ml
-1.5
+0.2
-0.0
-0.9
-1.8
stress
ALP with copper (II) chloride 0.6 mM
-1.4
-1.0
-1.4
+0.7
-0.9
stress
ALP with nitrate 50 mM
-1.5
+0.3
-0.3
-0.4
-1.9
stress
ALP with nitrite 0.3 mM
-1.1
+0.7
-0.7
-0.4
-1.9
stress
ALP with Fusidic 0.007 mg/ml
-1.5
+0.6
+0.2
-0.7
-1.9
stress
ALP with Nickel (II) chloride 3.5 mM
-1.7
+0.9
-0.8
-0.0
-1.0
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