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Cofit
Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
1
2
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4
5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_1879 and Dsui_1880 are separated by 206 nucleotides
Dsui_1880 and Dsui_1881 are separated by 233 nucleotides
Dsui_1881 and Dsui_1882 are separated by 62 nucleotides
Dsui_1882 and Dsui_1883 are separated by 103 nucleotides
Dsui_1879: Dsui_1879 - luciferase family oxidoreductase, group 1, at 1,976,525 to 1,977,526
_1879
Dsui_1880: Dsui_1880 - tRNA-Arg, at 1,977,733 to 1,977,807
_1880
Dsui_1881: Dsui_1881 - methyl-accepting chemotaxis protein, at 1,978,041 to 1,980,077
_1881
Dsui_1882: Dsui_1882 - hypothetical protein, at 1,980,140 to 1,980,637
_1882
Dsui_1883: Dsui_1883 - ATPase component of ABC transporters with duplicated ATPase domain, at 1,980,741 to 1,982,663
_1883
Group
Condition
Dsui
_1879
Dsui
_1880
Dsui
_1881
Dsui
_1882
Dsui
_1883
stress
ALP with Fusidic 0.007 mg/ml
-1.7
N.D.
+0.1
-0.6
-0.4
stress
ALP with Fusidic 0.01 mg/ml
-1.5
N.D.
+0.2
-0.7
-0.4
stress
ALP with sodium fluoride 30 mM
-1.8
N.D.
+0.2
-0.6
-0.0
stress
ALP with Fusidic 0.02 mg/ml
-1.6
N.D.
+0.2
-0.4
-0.3
stress
ALP with Cisplatin 0.0007 mg/ml
-1.5
N.D.
+0.1
-0.5
-0.2
stress
ALP with Thallium(I) acetate 0.004 mg/ml
-2.0
N.D.
+0.2
-0.3
+0.1
stress
ALP with Dimethyl Sulfoxide 2 vol%
-1.5
N.D.
+0.4
-0.9
-0.0
stress
ALP with Thallium(I) acetate 0.002 mg/ml
-2.0
N.D.
+0.2
-0.0
-0.2
stress
ALP with Zinc 2 mM
-1.5
N.D.
+0.3
-0.6
-0.2
stress
ALP with sodium fluoride 40 mM
-1.9
N.D.
+0.3
-0.6
+0.2
stress
ALP with nitrite 0.15 mM
-2.0
N.D.
+0.3
-0.4
+0.1
stress
ALP with Zinc 1 mM
-1.9
N.D.
+0.4
-0.5
+0.0
stress
ALP with nitrite 0.45 mM
-2.0
N.D.
+0.3
-0.1
-0.1
stress
ALP with nitrate 50 mM
-2.0
N.D.
+0.3
-0.3
+0.1
stress
ALP with perchlorate 3 mM
-1.9
N.D.
+0.4
-0.3
-0.1
carbon source
propionate (C)
-1.5
N.D.
+0.3
-0.5
-0.2
stress
ALP with perchlorate 6 mM
-1.9
N.D.
+0.4
-0.4
+0.1
carbon source
D-Lactate (C)
-1.4
N.D.
+0.3
-0.4
-0.3
stress
ALP with Thallium(I) acetate 0.003 mg/ml
-1.9
N.D.
+0.3
-0.4
+0.2
stress
ALP with Cisplatin 0.0008 mg/ml
-1.6
N.D.
+0.3
-0.3
-0.0
stress
ALP with Nickel (II) chloride 3.5 mM
-1.6
N.D.
+0.3
-0.3
-0.0
stress
ALP with Cisplatin 0.0009 mg/ml
-1.6
N.D.
+0.3
-0.6
+0.3
carbon source
L-Lactate (C)
-1.5
N.D.
+0.3
-0.4
+0.0
alp richb
ALP
-1.9
N.D.
+0.3
-0.2
+0.3
stress
ALP with Bacitracin 0.2 mg/ml
-1.2
N.D.
+0.4
-0.5
-0.1
stress
ALP with nitrite 0.3 mM
-2.0
N.D.
+0.3
+0.2
+0.1
stress
ALP with Chloride 75 mM
-1.8
N.D.
+0.5
-0.3
+0.2
carbon source
pyruvate (C)
-1.5
N.D.
+0.5
-0.2
+0.1
stress
ALP with perchlorate 12 mM
-1.8
N.D.
+0.4
+0.0
+0.4
stress
ALP with nitrate 75 mM
-1.9
N.D.
+0.3
+0.4
+0.2
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