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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_1868 and Dsui_1869 are separated by 322 nucleotides
Dsui_1869 and Dsui_1870 are separated by 130 nucleotides
Dsui_1870 and Dsui_1871 overlap by 4 nucleotides
Dsui_1871 and Dsui_1872 are separated by 29 nucleotides
Dsui_1868: Dsui_1868 - HD-GYP domain-containing protein, at 1,964,363 to 1,965,607
_1868
Dsui_1869: Dsui_1869 - hypothetical protein, at 1,965,930 to 1,966,208
_1869
Dsui_1870: Dsui_1870 - efflux transporter, outer membrane factor lipoprotein, NodT family, at 1,966,339 to 1,967,841
_1870
Dsui_1871: Dsui_1871 - hydrophobe/amphiphile efflux-1 (HAE1) family transporter, at 1,967,838 to 1,970,972
_1871
Dsui_1872: Dsui_1872 - RND family efflux transporter, MFP subunit, at 1,971,002 to 1,972,261
_1872
Group
Condition
Dsui
_1868
Dsui
_1869
Dsui
_1870
Dsui
_1871
Dsui
_1872
stress
ALP with Fusidic 0.007 mg/ml
-0.4
-0.1
-2.8
-2.4
-2.9
stress
ALP with Fusidic 0.01 mg/ml
+0.1
-0.3
-2.4
-2.3
-2.9
stress
ALP with Fusidic 0.02 mg/ml
+0.1
-0.0
-2.2
-2.1
-2.3
stress
ALP with copper (II) chloride 0.6 mM
-0.2
-0.0
-2.1
-1.1
-2.3
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-0.5
+0.4
-0.7
-1.6
-1.8
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.4
+0.4
-0.9
-1.2
-1.5
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.5
+0.4
-0.6
-1.4
-1.3
stress
ALP with Nickel (II) chloride 1.5 mM
-0.4
-0.2
-0.7
-0.5
-1.2
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.4
+0.5
-0.6
-1.1
-1.3
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.4
+0.3
-0.5
-1.1
-1.2
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-0.2
+0.5
-0.5
-1.3
-1.2
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.1
+0.3
-0.7
-0.9
-1.2
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
-0.5
+0.5
-0.6
-0.9
-0.9
stress
ALP with Thallium(I) acetate 0.004 mg/ml
-0.1
+0.1
-0.6
-0.7
-1.1
stress
ALP with Zinc 2 mM
-0.8
+0.6
-1.0
-0.6
-0.6
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.2
+0.5
-0.5
-1.1
-1.1
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.3
+0.6
-0.6
-1.0
-1.0
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.4
+0.7
-0.5
-1.0
-1.1
stress
ALP with Cisplatin 0.0009 mg/ml
-0.6
+0.3
-0.7
-0.4
-0.8
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.3
+0.6
-0.3
-1.1
-1.0
stress
ALP with Nickel (II) chloride 3.5 mM
-0.6
+0.4
-0.6
-0.5
-0.7
stress
ALP with nitrate 75 mM
-0.2
+0.6
-1.0
-0.6
-0.8
stress
ALP with Nickel (II) chloride 2.5 mM
-0.1
+0.5
-0.3
-0.5
-1.1
stress
ALP with sodium fluoride 40 mM
-0.4
+0.4
-0.5
-0.2
-0.7
stress
ALP with Cobalt chloride 0.2 mM
-0.3
+0.4
-0.4
-0.2
-0.8
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
-0.1
+0.6
-0.2
-0.8
-0.8
stress
ALP with Bacitracin 0.2 mg/ml
-0.4
+0.6
-0.5
-0.4
-0.5
stress
ALP with Chloride 75 mM
-0.2
+0.8
-0.7
-0.3
-0.7
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
+0.3
+0.6
-0.8
-0.3
-0.6
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
+0.4
+0.6
-0.7
-0.4
-0.6
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