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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_1762 and Dsui_1763 are separated by 73 nucleotides
Dsui_1763 and Dsui_1764 are separated by 34 nucleotides
Dsui_1764 and Dsui_1765 overlap by 11 nucleotides
Dsui_1765 and Dsui_1766 overlap by 8 nucleotides
Dsui_1762: Dsui_1762 - methylase involved in ubiquinone/menaquinone biosynthesis, at 1,850,400 to 1,850,894
_1762
Dsui_1763: Dsui_1763 - subfamily IIIC HAD-superfamily phosphatase, at 1,850,968 to 1,852,668
_1763
Dsui_1764: Dsui_1764 - acyl carrier protein, at 1,852,703 to 1,852,915
_1764
Dsui_1765: Dsui_1765 - acetyltransferase, ribosomal protein N-acetylase, at 1,852,905 to 1,853,489
_1765
Dsui_1766: Dsui_1766 - hypothetical protein, at 1,853,482 to 1,853,910
_1766
Group
Condition
Dsui
_1762
Dsui
_1763
Dsui
_1764
Dsui
_1765
Dsui
_1766
stress
ALP with Cisplatin 0.0008 mg/ml
-0.3
-0.2
-0.7
-0.4
-0.8
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.4
-0.3
-0.4
-0.5
-0.7
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.3
-0.2
-0.3
-0.3
-0.7
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.4
-0.1
-0.2
-0.4
-0.7
stress
ALP with Cisplatin 0.0009 mg/ml
+0.1
-0.3
-0.6
-0.2
-0.7
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.1
-0.2
-0.3
-0.4
-0.6
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.3
-0.1
-0.2
-0.3
-0.7
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.3
-0.1
-0.2
-0.3
-0.6
alp rich
rich media
-0.3
-0.2
-0.4
-0.3
-0.1
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-0.2
-0.2
-0.1
-0.4
-0.5
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.0
-0.3
-0.4
-0.1
-0.3
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.2
+0.0
-0.2
-0.3
-0.6
alp rich
rich media
-0.2
-0.2
-0.4
-0.2
-0.2
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-0.2
-0.2
-0.2
-0.1
-0.3
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
-0.1
-0.2
-0.1
-0.4
-0.2
stress
rich media with hydrogen peroxide 5 mM
-0.1
-0.0
-0.2
-0.2
-0.3
carbon source
a-Ketoglutaric (C)
-0.4
-0.1
-0.5
+0.0
+0.1
carbon source
D-Lactate (C)
-0.1
-0.2
+0.2
-0.2
-0.5
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
-0.2
-0.3
+0.0
-0.3
+0.2
stress
ALP with copper (II) chloride 0.6 mM
-0.4
-0.1
-0.4
+0.1
+0.6
carbon source
R2A with sodium pyruvate
+0.2
-0.2
+0.4
-0.0
-0.3
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-0.1
+0.2
+0.3
-0.1
+0.1
stress
ALP with sodium fluoride 40 mM
+0.2
+0.2
-0.1
+0.1
+0.4
stress
ALP with Nickel (II) chloride 3.5 mM
-0.0
+0.0
+0.3
+0.2
+0.4
stress
ALP with Bacitracin 0.2 mg/ml
+0.1
+0.2
+0.3
+0.1
+0.2
stress
ALP with Fusidic 0.007 mg/ml
-0.1
+0.2
+0.0
+0.2
+0.6
stress
ALP with Fusidic 0.01 mg/ml
+0.4
+0.4
-0.1
+0.3
+0.1
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
+0.0
+0.2
+0.1
+0.6
+0.0
anaerobic
anaerobic ALP with 3 all (C)s and 5mM perchlorate
-0.0
+0.4
+0.3
+0.2
+0.4
stress
ALP with Nickel (II) chloride 2.5 mM
+0.0
+0.4
+0.4
+0.5
+0.0
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