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Cofit
Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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2
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4
5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_1701 and Dsui_1702 are separated by 204 nucleotides
Dsui_1702 and Dsui_1703 are separated by 14 nucleotides
Dsui_1703 and Dsui_1704 are separated by 275 nucleotides
Dsui_1704 and Dsui_1705 are separated by 30 nucleotides
Dsui_1701: Dsui_1701 - restriction endonuclease, at 1,788,477 to 1,789,109
_1701
Dsui_1702: Dsui_1702 - TonB family protein, at 1,789,314 to 1,790,039
_1702
Dsui_1703: Dsui_1703 - ADP-ribose pyrophosphatase, at 1,790,054 to 1,790,602
_1703
Dsui_1704: Dsui_1704 - flagellar motor stator protein MotA, at 1,790,878 to 1,791,735
_1704
Dsui_1705: Dsui_1705 - flagellar motor protein, at 1,791,766 to 1,792,713
_1705
Group
Condition
Dsui
_1701
Dsui
_1702
Dsui
_1703
Dsui
_1704
Dsui
_1705
stress
ALP with Thallium(I) acetate 0.004 mg/ml
-1.8
-2.1
-0.6
-0.4
-0.3
stress
ALP with Thallium(I) acetate 0.003 mg/ml
-1.8
-2.1
-0.4
-0.3
-0.2
stress
ALP with Nickel (II) chloride 1.5 mM
-1.2
-1.5
-0.8
-0.6
-0.5
stress
ALP with sodium fluoride 40 mM
-1.5
-2.0
-0.3
-0.2
-0.2
stress
ALP with Cobalt chloride 0.25 mM
-1.4
-1.8
-0.5
-0.3
-0.2
stress
ALP with sodium fluoride 30 mM
-1.5
-1.8
-0.3
-0.2
-0.1
stress
ALP with Thallium(I) acetate 0.002 mg/ml
-1.8
-1.2
-0.3
-0.2
-0.2
stress
ALP with nitrite 0.3 mM
-1.8
-2.2
+0.2
+0.2
+0.2
stress
ALP with nitrite 0.45 mM
-1.8
-2.2
+0.3
+0.1
+0.2
stress
ALP with nitrate 50 mM
-1.9
-2.2
+0.2
+0.3
+0.3
stress
ALP with nitrite 0.15 mM
-1.8
-2.1
+0.3
+0.1
+0.2
stress
ALP with perchlorate 6 mM
-2.3
-0.7
+0.0
-0.1
+0.0
alp richb
ALP
-1.2
-2.1
+0.2
+0.1
+0.1
stress
ALP with perchlorate 12 mM
-2.2
-0.6
+0.2
-0.1
+0.0
stress
ALP with Cisplatin 0.0009 mg/ml
-1.5
-1.8
+0.2
+0.3
+0.2
stress
ALP with Zinc 1 mM
-1.7
-1.2
+0.1
+0.1
+0.3
stress
ALP with perchlorate 3 mM
-2.2
-0.1
+0.1
-0.4
+0.2
stress
ALP with nitrate 75 mM
-1.8
-0.8
+0.2
-0.0
+0.1
stress
ALP with Cisplatin 0.0008 mg/ml
-1.4
-1.8
+0.3
+0.4
+0.2
carbon source
pyruvate (C)
-1.9
-0.3
+0.2
-0.2
+0.1
stress
ALP with Fusidic 0.007 mg/ml
-2.0
-0.1
+0.4
-0.2
-0.1
stress
ALP with Zinc 2 mM
-1.0
-1.9
+0.3
+0.4
+0.3
stress
ALP with Dimethyl Sulfoxide 2 vol%
-1.9
-0.5
+0.3
-0.0
+0.2
carbon source
pyruvate (C)
-1.9
-0.3
+0.4
-0.0
+0.0
stress
ALP with Chloride 75 mM
-1.6
-0.6
+0.4
+0.1
+0.1
carbon source
D,L-Lactate (C)
-1.8
-0.1
+0.4
-0.1
+0.2
carbon source
D-Lactate (C)
-1.7
-0.1
+0.4
-0.2
+0.2
stress
ALP with Bacitracin 0.2 mg/ml
-2.1
+0.3
+0.4
-0.1
+0.1
carbon source
propionate (C)
-1.8
+0.5
+0.3
-0.0
+0.1
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.2
-1.1
-0.2
+0.6
+0.5
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