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Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_1689 and Dsui_1690 are separated by 155 nucleotides
Dsui_1690 and Dsui_1691 are separated by 49 nucleotides
Dsui_1691 and Dsui_1692 overlap by 1 nucleotides
Dsui_1692 and Dsui_1694 are separated by 1177 nucleotides
Dsui_1689: Dsui_1689 - thioredoxin-disulfide reductase, at 1,776,432 to 1,777,391
_1689
Dsui_1690: Dsui_1690 - cAMP-binding protein, at 1,777,547 to 1,778,206
_1690
Dsui_1691: Dsui_1691 - DNA segregation ATPase, FtsK/SpoIIIE family, at 1,778,256 to 1,780,571
_1691
Dsui_1692: Dsui_1692 - periplasmic chaperone LolA, at 1,780,571 to 1,781,203
_1692
Dsui_1694: Dsui_1694 - AAA ATPase, at 1,782,381 to 1,783,679
_1694
Group
Condition
Dsui
_1689
Dsui
_1690
Dsui
_1691
Dsui
_1692
Dsui
_1694
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
-1.5
N.D.
N.D.
+0.1
stress
ALP with Nickel (II) chloride 1.5 mM
N.D.
-0.4
N.D.
N.D.
-0.8
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
-1.2
N.D.
N.D.
+0.1
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
-1.1
N.D.
N.D.
-0.1
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
-1.2
N.D.
N.D.
+0.1
stress
ALP with Cisplatin 0.0007 mg/ml
N.D.
-0.4
N.D.
N.D.
-0.7
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-0.8
N.D.
N.D.
+0.0
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-0.7
N.D.
N.D.
-0.1
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-0.7
N.D.
N.D.
-0.1
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
-0.7
N.D.
N.D.
-0.0
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-0.7
N.D.
N.D.
+0.1
stress
ALP with Thallium(I) acetate 0.004 mg/ml
N.D.
-0.3
N.D.
N.D.
-0.3
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
-0.6
N.D.
N.D.
-0.0
stress
ALP with Thallium(I) acetate 0.003 mg/ml
N.D.
-0.3
N.D.
N.D.
-0.2
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-0.6
N.D.
N.D.
+0.1
stress
ALP with copper (II) chloride 0.6 mM
N.D.
-0.0
N.D.
N.D.
-0.5
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
-0.5
N.D.
N.D.
-0.0
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
N.D.
-0.6
N.D.
N.D.
+0.1
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-0.5
N.D.
N.D.
+0.3
carbon source
a-Ketoglutaric (C)
N.D.
+0.3
N.D.
N.D.
-0.2
carbon source
pyruvate (C)
N.D.
+0.5
N.D.
N.D.
-0.1
carbon source
pyruvate (C)
N.D.
+0.5
N.D.
N.D.
-0.1
carbon source
propionate (C)
N.D.
+0.6
N.D.
N.D.
-0.2
stress
ALP with Nickel (II) chloride 2.5 mM
N.D.
+0.7
N.D.
N.D.
-0.2
carbon source
defined media with 30 mM sodium lactate
N.D.
+0.2
N.D.
N.D.
+0.4
anaerobic
anaerobic ALP with 3 all (C)s and 5mM perchlorate
N.D.
+0.2
N.D.
N.D.
+0.4
carbon source
L-Lactate (C)
N.D.
+0.5
N.D.
N.D.
+0.0
alp rich
rich media
N.D.
+0.3
N.D.
N.D.
+0.3
carbon source
defined media with 30 mM sodium lactate
N.D.
+0.3
N.D.
N.D.
+0.3
carbon source
propionate (C)
N.D.
+0.7
N.D.
N.D.
-0.1
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