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Cofit
Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
1
2
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_1661 and Dsui_1662 are separated by 119 nucleotides
Dsui_1662 and Dsui_1663 are separated by 162 nucleotides
Dsui_1663 and Dsui_1664 are separated by 101 nucleotides
Dsui_1664 and Dsui_1665 are separated by 33 nucleotides
Dsui_1661: Dsui_1661 - hypothetical protein, at 1,745,314 to 1,745,790
_1661
Dsui_1662: Dsui_1662 - Oxidoreductase NAD-binding domain/Flavodoxin, at 1,745,910 to 1,747,262
_1662
Dsui_1663: Dsui_1663 - ABC-type Co2+ transport system, periplasmic component, at 1,747,425 to 1,748,228
_1663
Dsui_1664: Dsui_1664 - putative periplasmic protein, at 1,748,330 to 1,748,854
_1664
Dsui_1665: Dsui_1665 - hypothetical protein, at 1,748,888 to 1,749,547
_1665
Group
Condition
Dsui
_1661
Dsui
_1662
Dsui
_1663
Dsui
_1664
Dsui
_1665
stress
ALP with Cobalt chloride 0.2 mM
-1.3
-1.1
-0.2
+0.1
-0.0
stress
ALP with nitrate 50 mM
-1.6
-0.6
+0.0
+0.1
-0.1
stress
ALP with nitrate 75 mM
-1.5
-0.6
+0.0
-0.0
+0.2
stress
ALP with sodium fluoride 40 mM
-1.4
-0.3
-0.1
+0.2
-0.2
stress
ALP with Zinc 2 mM
-1.3
-0.5
+0.0
-0.0
+0.1
stress
ALP with Zinc 1 mM
-1.4
-0.4
-0.0
+0.1
+0.2
stress
ALP with nitrite 0.15 mM
-1.5
-0.5
+0.1
+0.2
+0.1
stress
ALP with nitrite 0.45 mM
-1.5
-0.4
-0.1
+0.2
+0.2
stress
ALP with Chloride 75 mM
-1.1
-0.6
+0.0
+0.3
-0.1
stress
ALP with Fusidic 0.007 mg/ml
-0.9
+0.2
-0.2
-0.4
-0.1
stress
ALP with nitrite 0.3 mM
-1.5
-0.1
-0.0
+0.1
+0.2
stress
ALP with Thallium(I) acetate 0.004 mg/ml
-1.5
-0.4
-0.0
+0.1
+0.4
stress
ALP with perchlorate 3 mM
-1.1
-0.5
+0.0
+0.4
-0.2
stress
ALP with Cisplatin 0.0009 mg/ml
-1.2
-0.5
+0.2
-0.3
+0.4
stress
ALP with Thallium(I) acetate 0.003 mg/ml
-1.5
-0.2
+0.3
+0.2
+0.2
stress
ALP with Thallium(I) acetate 0.002 mg/ml
-1.5
-0.3
+0.1
+0.3
+0.5
stress
ALP with Nickel (II) chloride 3.5 mM
-1.1
-0.2
-0.2
+0.4
+0.2
anaerobic
Anaero. lactate (C), chlorate electron acceptor
+0.3
-0.5
+0.4
+0.6
-0.5
carbon source
R2A with sodium pyruvate
+0.3
-0.5
+0.8
+0.4
-0.4
stress
ALP with Nickel (II) chloride 2.5 mM
-0.5
-0.1
+0.2
+0.8
+0.5
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.1
-0.5
+0.4
+1.0
+0.3
carbon source
R2A with sodium pyruvate
+1.0
-0.1
+0.3
+0.4
-0.4
anaerobic
Anaero. lactate (C), chlorate electron acceptor
+0.3
-0.1
+0.6
+0.9
-0.5
carbon source
R2A with sodium pyruvate
+0.7
+0.2
+0.2
+0.5
-0.4
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
+0.7
-0.4
+0.3
+0.8
+0.0
carbon source
defined media with 30 mM sodium lactate
+0.4
+0.6
+0.0
+0.7
-0.1
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
+0.5
-0.2
+0.4
+0.7
+0.3
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
+0.2
+0.3
+0.5
+0.8
-0.0
alp rich
rich media
+0.2
+0.4
+0.1
+0.6
+0.8
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
+0.9
-0.1
+0.3
+0.4
+0.6
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