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Cofit
Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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2
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_1656 and Dsui_1657 are separated by 9 nucleotides
Dsui_1657 and Dsui_1658 are separated by 3 nucleotides
Dsui_1658 and Dsui_1659 are separated by 350 nucleotides
Dsui_1659 and Dsui_1660 are separated by 160 nucleotides
Dsui_1656: Dsui_1656 - hypothetical protein, at 1,738,943 to 1,739,290
_1656
Dsui_1657: Dsui_1657 - carbohydrate-selective porin, at 1,739,300 to 1,740,850
_1657
Dsui_1658: Dsui_1658 - uncharacterized protein probably involved in high-affinity Fe2+ transport, at 1,740,854 to 1,741,405
_1658
Dsui_1659: Dsui_1659 - Uncharacterized protein conserved in bacteria (DUF2325), at 1,741,756 to 1,743,075
_1659
Dsui_1660: Dsui_1660 - outer membrane cobalamin receptor protein, at 1,743,236 to 1,745,314
_1660
Group
Condition
Dsui
_1656
Dsui
_1657
Dsui
_1658
Dsui
_1659
Dsui
_1660
stress
ALP with Bacitracin 0.2 mg/ml
+0.1
-0.1
-0.1
-2.3
-2.4
stress
ALP with perchlorate 6 mM
-0.0
+0.0
-0.4
-1.9
-2.5
stress
ALP with perchlorate 12 mM
+0.1
+0.0
-0.2
-2.3
-2.4
stress
ALP with Fusidic 0.007 mg/ml
-0.2
+0.1
-0.1
-2.1
-2.2
stress
ALP with Chloride 75 mM
+0.2
+0.1
-0.0
-2.3
-2.4
carbon source
D,L-Lactate (C)
-0.1
-0.1
-0.1
-2.0
-2.1
stress
ALP with nitrate 75 mM
-0.1
-0.1
-0.1
-2.5
-1.6
carbon source
pyruvate (C)
+0.0
-0.1
-0.2
-2.0
-2.1
stress
ALP with perchlorate 3 mM
-0.0
+0.1
-0.1
-1.9
-2.3
stress
ALP with nitrite 0.3 mM
+0.0
+0.1
-0.1
-2.5
-1.6
carbon source
L-Lactate (C)
+0.0
+0.1
-0.5
-1.9
-1.8
stress
ALP with Thallium(I) acetate 0.004 mg/ml
-0.0
+0.0
+0.0
-2.4
-1.6
stress
ALP with Dimethyl Sulfoxide 2 vol%
+0.0
+0.0
-0.1
-1.8
-2.1
carbon source
D-Lactate (C)
-0.1
+0.0
-0.2
-1.9
-1.7
alp richb
ALP
+0.1
-0.0
-0.0
-2.4
-1.5
carbon source
propionate (C)
+0.1
+0.1
-0.3
-1.9
-2.0
carbon source
D,L-Lactate (C)
+0.3
+0.1
-0.0
-2.0
-2.1
stress
ALP with nitrite 0.45 mM
+0.1
+0.1
+0.1
-2.5
-1.6
carbon source
pyruvate (C)
+0.2
-0.0
-0.3
-2.0
-1.5
stress
ALP with sodium fluoride 40 mM
+0.1
+0.1
+0.0
-2.3
-1.5
stress
ALP with Zinc 1 mM
+0.0
+0.3
+0.1
-2.4
-1.5
stress
ALP with Thallium(I) acetate 0.003 mg/ml
+0.2
-0.0
-0.2
-2.0
-1.5
stress
ALP with nitrate 50 mM
+0.2
+0.1
+0.0
-2.1
-1.7
stress
ALP with Fusidic 0.02 mg/ml
+0.2
+0.2
-0.1
-1.9
-1.8
stress
ALP with Cisplatin 0.0009 mg/ml
+0.1
+0.3
-0.1
-2.2
-1.3
stress
ALP with Cisplatin 0.0008 mg/ml
+0.2
+0.2
-0.1
-2.1
-1.2
stress
ALP with sodium fluoride 30 mM
+0.2
+0.0
+0.1
-2.2
-1.3
stress
ALP with Thallium(I) acetate 0.002 mg/ml
+0.1
+0.2
+0.1
-1.8
-1.6
stress
ALP with Zinc 2 mM
+0.1
+0.4
+0.3
-2.3
-1.0
stress
ALP with Nickel (II) chloride 2.5 mM
+0.7
+0.7
+0.7
-1.4
-0.5
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