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Cofit
Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_1571 and Dsui_1572 are separated by 83 nucleotides
Dsui_1572 and Dsui_1573 are separated by 141 nucleotides
Dsui_1573 and Dsui_1574 are separated by 82 nucleotides
Dsui_1574 and Dsui_1575 are separated by 64 nucleotides
Dsui_1571: Dsui_1571 - Fe-S cluster protector protein, at 1,644,533 to 1,644,805
_1571
Dsui_1572: Dsui_1572 - hypothetical protein, at 1,644,889 to 1,645,296
_1572
Dsui_1573: Dsui_1573 - phosphate transport system regulatory protein PhoU, at 1,645,438 to 1,646,148
_1573
Dsui_1574: Dsui_1574 - ribose 5-phosphate isomerase, at 1,646,231 to 1,646,902
_1574
Dsui_1575: Dsui_1575 - hypothetical protein, at 1,646,967 to 1,648,655
_1575
Group
Condition
Dsui
_1571
Dsui
_1572
Dsui
_1573
Dsui
_1574
Dsui
_1575
stress
ALP with copper (II) chloride 0.6 mM
+0.2
-2.0
N.D.
N.D.
-0.3
stress
ALP with Thallium(I) acetate 0.004 mg/ml
-0.8
-0.6
N.D.
N.D.
-0.3
stress
ALP with Cobalt chloride 0.2 mM
-0.9
-0.6
N.D.
N.D.
-0.2
stress
ALP with Cisplatin 0.0008 mg/ml
-0.0
-1.2
N.D.
N.D.
-0.3
stress
ALP with Nickel (II) chloride 1.5 mM
-0.2
-0.9
N.D.
N.D.
-0.4
stress
ALP with sodium fluoride 30 mM
-0.1
-1.1
N.D.
N.D.
-0.2
stress
ALP with nitrite 0.3 mM
-0.2
-0.9
N.D.
N.D.
-0.2
stress
ALP with Cisplatin 0.0007 mg/ml
-0.3
-0.6
N.D.
N.D.
-0.3
alp richb
ALP
-0.0
-0.9
N.D.
N.D.
-0.3
stress
ALP with nitrite 0.45 mM
-0.6
-0.5
N.D.
N.D.
-0.1
carbon source
L-Lactate (C)
-0.4
-0.7
N.D.
N.D.
-0.0
stress
ALP with Cobalt chloride 0.25 mM
-1.0
-0.0
N.D.
N.D.
-0.1
stress
ALP with nitrate 50 mM
+0.2
-0.8
N.D.
N.D.
-0.1
carbon source
a-Ketoglutaric (C)
+0.3
-0.9
N.D.
N.D.
-0.0
carbon source
propionate (C)
+0.5
-0.7
N.D.
N.D.
-0.2
stress
ALP with perchlorate 3 mM
+0.4
-0.7
N.D.
N.D.
-0.0
stress
ALP with Fusidic 0.02 mg/ml
+1.6
-0.7
N.D.
N.D.
-0.1
stress
ALP with Fusidic 0.007 mg/ml
+1.5
-0.2
N.D.
N.D.
-0.4
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.2
+0.6
N.D.
N.D.
+0.2
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.3
+0.6
N.D.
N.D.
+0.2
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.4
+0.6
N.D.
N.D.
+0.2
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.3
+0.7
N.D.
N.D.
+0.2
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.4
+0.6
N.D.
N.D.
+0.2
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.3
+0.7
N.D.
N.D.
+0.2
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
+0.3
+0.7
N.D.
N.D.
+0.3
stress
ALP with Fusidic 0.01 mg/ml
+1.8
-0.4
N.D.
N.D.
-0.1
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.3
+0.8
N.D.
N.D.
+0.2
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
+0.5
+0.6
N.D.
N.D.
+0.2
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
+0.4
+0.7
N.D.
N.D.
+0.3
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
+0.3
+0.8
N.D.
N.D.
+0.3
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