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Cofit
Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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2
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_1562 and Dsui_1563 are separated by 20 nucleotides
Dsui_1563 and Dsui_1564 are separated by 69 nucleotides
Dsui_1564 and Dsui_1565 are separated by 180 nucleotides
Dsui_1565 and Dsui_1566 are separated by 20 nucleotides
Dsui_1562: Dsui_1562 - phosphoribulokinase, at 1,630,705 to 1,631,580
_1562
Dsui_1563: Dsui_1563 - fructose-1,6-bisphosphatase, at 1,631,601 to 1,632,599
_1563
Dsui_1564: Dsui_1564 - PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein, at 1,632,669 to 1,636,514
_1564
Dsui_1565: Dsui_1565 - diguanylate cyclase (GGDEF) domain-containing protein, at 1,636,695 to 1,639,238
_1565
Dsui_1566: Dsui_1566 - inositol monophosphatase/fructose-1,6-bisphosphatase family protein, at 1,639,259 to 1,640,071
_1566
Group
Condition
Dsui
_1562
Dsui
_1563
Dsui
_1564
Dsui
_1565
Dsui
_1566
stress
ALP with Chloride 75 mM
-0.9
N.D.
-0.6
-1.4
-0.6
carbon source
propionate (C)
-1.0
N.D.
-0.5
-1.1
-0.6
stress
ALP with Nickel (II) chloride 1.5 mM
-0.9
N.D.
-0.5
-0.7
-1.1
stress
ALP with nitrate 75 mM
-0.6
N.D.
-0.5
-1.3
-0.7
stress
ALP with Thallium(I) acetate 0.002 mg/ml
-0.6
N.D.
-0.5
-1.4
-0.5
stress
ALP with Cobalt chloride 0.2 mM
-0.3
N.D.
-0.4
-1.1
-1.1
stress
ALP with perchlorate 6 mM
-0.7
N.D.
-0.3
-1.7
-0.2
stress
ALP with Zinc 1 mM
-0.5
N.D.
-0.4
-1.4
-0.5
stress
ALP with Thallium(I) acetate 0.003 mg/ml
-0.3
N.D.
-0.4
-1.4
-0.7
stress
ALP with Zinc 2 mM
-0.3
N.D.
-0.5
-1.1
-0.8
stress
ALP with nitrate 50 mM
-0.5
N.D.
-0.3
-1.5
-0.3
stress
ALP with nitrite 0.45 mM
-0.7
N.D.
-0.2
-1.4
-0.3
stress
ALP with nitrite 0.3 mM
-0.2
N.D.
-0.4
-1.4
-0.5
stress
ALP with Dimethyl Sulfoxide 2 vol%
-0.6
N.D.
-0.4
-1.4
-0.1
stress
ALP with sodium fluoride 30 mM
-0.6
N.D.
-0.3
-1.1
-0.4
carbon source
D-Lactate (C)
-0.6
N.D.
-0.3
-1.0
-0.4
stress
ALP with Bacitracin 0.2 mg/ml
-0.6
N.D.
-0.3
-1.5
-0.0
carbon source
a-Ketoglutaric (C)
-0.9
N.D.
-0.2
-0.9
-0.4
carbon source
propionate (C)
-0.5
N.D.
-0.4
-1.0
-0.5
carbon source
pyruvate (C)
-0.7
N.D.
-0.2
-1.2
-0.2
stress
ALP with Nickel (II) chloride 3.5 mM
-0.3
N.D.
-0.5
-1.0
-0.5
carbon source
D,L-Lactate (C)
-0.8
N.D.
-0.4
-1.0
-0.1
carbon source
a-Ketoglutaric (C)
-0.8
N.D.
-0.5
-0.5
-0.5
stress
ALP with nitrite 0.15 mM
-0.6
N.D.
-0.3
-1.0
-0.3
alp richb
ALP
-0.3
N.D.
-0.3
-1.2
-0.3
carbon source
L-Lactate (C)
-0.6
N.D.
-0.2
-1.1
-0.2
stress
ALP with perchlorate 3 mM
-0.5
N.D.
-0.3
-1.4
+0.1
carbon source
D-Lactate (C)
-0.7
N.D.
-0.4
-1.0
+0.1
stress
ALP with Cobalt chloride 0.25 mM
+0.2
N.D.
-0.4
-1.0
-0.5
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
-2.0
N.D.
-0.3
+0.1
+1.4
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