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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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2
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_1540 and Dsui_1541 overlap by 1 nucleotides
Dsui_1541 and Dsui_1542 are separated by 117 nucleotides
Dsui_1542 and Dsui_1543 are separated by 9 nucleotides
Dsui_1543 and Dsui_1544 are separated by 73 nucleotides
Dsui_1540: Dsui_1540 - NAD(FAD)-dependent dehydrogenase, at 1,600,380 to 1,601,675
_1540
Dsui_1541: Dsui_1541 - cytochrome c553, at 1,601,675 to 1,602,010
_1541
Dsui_1542: Dsui_1542 - small-conductance mechanosensitive channel, at 1,602,128 to 1,603,423
_1542
Dsui_1543: Dsui_1543 - tRNA/rRNA cytosine-C5-methylase, at 1,603,433 to 1,604,761
_1543
Dsui_1544: Dsui_1544 - Protein of unknown function (DUF3108), at 1,604,835 to 1,605,572
_1544
Group
Condition
Dsui
_1540
Dsui
_1541
Dsui
_1542
Dsui
_1543
Dsui
_1544
stress
ALP with Nickel (II) chloride 1.5 mM
-0.3
-0.3
-1.3
-0.9
-1.6
stress
ALP with copper (II) chloride 0.6 mM
+0.0
+0.0
-1.4
-0.5
-1.7
stress
ALP with Cisplatin 0.0007 mg/ml
-0.3
-0.0
-0.9
-0.7
-1.4
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.1
+0.2
+0.1
-0.5
-3.1
stress
ALP with Nickel (II) chloride 2.5 mM
+0.6
+0.2
-1.9
-1.0
-1.2
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
+0.2
-0.3
-0.0
-0.5
-2.5
stress
ALP with Fusidic 0.007 mg/ml
+0.6
+0.6
-0.5
+0.0
-3.7
stress
ALP with Nickel (II) chloride 3.5 mM
+0.2
+0.0
-1.3
-0.8
-1.1
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.2
+0.1
-0.1
-0.1
-2.7
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.1
+0.1
+0.2
-0.3
-2.8
stress
ALP with Cobalt chloride 0.25 mM
+0.5
+0.2
-0.9
-1.2
-1.5
anaerobic
anaerobic ALP with 3 all (C)s and 5mM perchlorate
+0.2
-0.2
-0.4
+0.0
-2.4
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
+0.0
+0.2
+0.5
-0.3
-3.1
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.1
+0.2
-0.2
-0.3
-2.6
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.0
+0.2
+0.1
-0.2
-2.8
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.7
-1.4
+0.6
-0.7
-0.4
stress
ALP with Cobalt chloride 0.2 mM
+0.3
+0.1
-1.0
-0.9
-1.0
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.1
+0.1
-0.0
-0.0
-2.6
stress
ALP with Thallium(I) acetate 0.004 mg/ml
-0.1
-0.2
-0.3
-0.3
-1.5
anaerobic
Anaero. lactate (C), nitrate electron acceptor
-1.2
-0.8
+0.2
-0.1
-0.4
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.0
+0.1
+0.2
-0.1
-2.6
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.8
-0.8
+0.1
-0.6
-0.2
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
+0.0
+0.2
+0.3
-0.3
-2.5
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.2
+0.2
+0.1
-0.2
-2.4
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.1
+0.0
+0.2
-0.2
-2.4
stress
ALP with Fusidic 0.01 mg/ml
+0.8
+0.7
-0.3
+0.0
-3.4
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.7
-1.2
+0.5
-0.2
-0.2
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.7
-1.3
+0.6
-0.4
-0.1
stress
ALP with Fusidic 0.02 mg/ml
+0.8
+0.7
-0.3
+0.1
-3.2
stress
ALP with Zinc 2 mM
+0.6
+0.6
-0.6
-0.2
-0.7
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