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Cofit
Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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2
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_1526 and Dsui_1527 are separated by 635 nucleotides
Dsui_1527 and Dsui_1528 are separated by 165 nucleotides
Dsui_1528 and Dsui_1529 overlap by 14 nucleotides
Dsui_1529 and Dsui_1530 are separated by 31 nucleotides
Dsui_1526: Dsui_1526 - hypothetical protein, at 1,588,664 to 1,588,861
_1526
Dsui_1527: Dsui_1527 - hypothetical protein, at 1,589,497 to 1,589,706
_1527
Dsui_1528: Dsui_1528 - signal transduction histidine kinase, at 1,589,872 to 1,591,311
_1528
Dsui_1529: Dsui_1529 - response regulator with CheY-like receiver domain and winged-helix DNA-binding domain, at 1,591,298 to 1,592,008
_1529
Dsui_1530: Dsui_1530 - hypothetical protein, at 1,592,040 to 1,592,327
_1530
Group
Condition
Dsui
_1526
Dsui
_1527
Dsui
_1528
Dsui
_1529
Dsui
_1530
stress
ALP with copper (II) chloride 0.6 mM
-1.6
N.D.
-2.3
-4.2
-0.5
stress
ALP with Fusidic 0.007 mg/ml
-0.3
N.D.
-2.0
-4.5
-1.0
stress
ALP with Fusidic 0.01 mg/ml
-0.4
N.D.
-2.1
-3.6
-0.9
stress
ALP with Fusidic 0.02 mg/ml
-0.5
N.D.
-2.2
-4.4
+0.4
carbon source
D,L-Lactate (C)
+0.1
N.D.
-0.5
-5.3
-0.7
stress
ALP with Bacitracin 0.2 mg/ml
+0.1
N.D.
-0.9
-4.4
-1.1
carbon source
a-Ketoglutaric (C)
-0.2
N.D.
-0.5
-4.6
-0.4
stress
ALP with nitrate 50 mM
+0.3
N.D.
-0.6
-3.3
-1.9
stress
ALP with Zinc 2 mM
-0.3
N.D.
-1.6
-4.0
+0.5
stress
ALP with Thallium(I) acetate 0.002 mg/ml
+0.2
N.D.
-0.5
-3.2
-1.9
stress
ALP with Nickel (II) chloride 1.5 mM
+0.3
N.D.
-0.3
-4.1
-1.3
stress
ALP with Nickel (II) chloride 3.5 mM
+0.1
N.D.
-0.5
-3.5
-1.5
stress
ALP with perchlorate 3 mM
+0.1
N.D.
-0.6
-3.5
-1.1
carbon source
L-Lactate (C)
+0.0
N.D.
-0.6
-3.8
-0.7
stress
ALP with Zinc 1 mM
+0.1
N.D.
-0.8
-4.2
-0.2
stress
ALP with Cisplatin 0.0008 mg/ml
+0.1
N.D.
-0.4
-3.2
-1.5
stress
ALP with Chloride 75 mM
+0.2
N.D.
-0.6
-3.3
-1.2
carbon source
propionate (C)
+0.0
N.D.
-0.7
-4.1
+0.1
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.6
N.D.
-1.6
-2.5
+0.1
carbon source
pyruvate (C)
-0.0
N.D.
-0.4
-3.3
-0.8
stress
ALP with nitrate 75 mM
+0.3
N.D.
-1.3
-4.1
+0.7
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.5
N.D.
-1.6
-2.0
-0.4
stress
ALP with nitrite 0.45 mM
+0.1
N.D.
-0.5
-4.0
+0.1
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.3
N.D.
-1.3
-2.8
+0.1
stress
ALP with Nickel (II) chloride 2.5 mM
+0.6
N.D.
-0.4
-3.5
-0.8
stress
ALP with Cisplatin 0.0007 mg/ml
+0.2
N.D.
-0.2
-3.7
-0.4
carbon source
a-Ketoglutaric (C)
-0.1
N.D.
-0.7
-3.8
+0.5
carbon source
propionate (C)
-0.1
N.D.
-0.7
-3.8
+0.8
stress
ALP with Cobalt chloride 0.2 mM
+0.3
N.D.
-0.5
-3.1
-0.6
stress
ALP with Cobalt chloride 0.25 mM
+0.5
N.D.
-0.1
-2.4
-1.5
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