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Cofit
Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_1522 and Dsui_1523 are separated by 131 nucleotides
Dsui_1523 and Dsui_1524 are separated by 64 nucleotides
Dsui_1524 and Dsui_1525 are separated by 87 nucleotides
Dsui_1525 and Dsui_1526 are separated by 73 nucleotides
Dsui_1522: Dsui_1522 - serine/threonine protein kinase, at 1,584,010 to 1,585,344
_1522
Dsui_1523: Dsui_1523 - drug resistance transporter, EmrB/QacA subfamily, at 1,585,476 to 1,586,927
_1523
Dsui_1524: Dsui_1524 - transcriptional regulator, at 1,586,992 to 1,587,495
_1524
Dsui_1525: Dsui_1525 - sulfate/thiosulfate-binding protein, at 1,587,583 to 1,588,590
_1525
Dsui_1526: Dsui_1526 - hypothetical protein, at 1,588,664 to 1,588,861
_1526
Group
Condition
Dsui
_1522
Dsui
_1523
Dsui
_1524
Dsui
_1525
Dsui
_1526
stress
ALP with copper (II) chloride 0.6 mM
+0.0
+0.1
-1.0
-0.7
-1.6
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.3
-0.9
+0.2
-2.2
-0.5
stress
ALP with Bacitracin 0.2 mg/ml
-0.1
-2.4
-0.2
-0.5
+0.1
carbon source
pyruvate (C)
+0.1
-1.9
-0.2
-0.7
-0.1
carbon source
D,L-Lactate (C)
+0.1
-2.0
-0.4
-0.5
+0.1
carbon source
L-Lactate (C)
+0.1
-1.7
-0.1
-1.2
+0.1
carbon source
a-Ketoglutaric (C)
+0.1
-1.7
-0.1
-0.6
-0.2
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
+0.3
-0.9
+0.7
-2.3
-0.4
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.4
-0.8
+0.5
-2.1
-0.4
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.4
-0.7
+0.4
-1.9
-0.5
stress
ALP with Thallium(I) acetate 0.002 mg/ml
-0.0
-1.4
-0.3
-0.8
+0.2
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
+0.4
-0.8
+0.6
-2.2
-0.3
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.5
-0.9
+0.4
-1.9
-0.3
stress
ALP with nitrate 50 mM
+0.2
-1.4
-0.2
-1.1
+0.3
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.5
-0.7
+0.5
-1.8
-0.6
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.3
-0.8
+0.5
-1.9
-0.3
stress
ALP with perchlorate 3 mM
+0.2
-2.4
-0.2
+0.1
+0.1
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
+0.4
-0.7
+0.4
-1.8
-0.3
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
+0.5
-0.8
+0.4
-1.7
-0.4
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.5
-0.7
+0.4
-1.9
-0.2
stress
ALP with nitrate 75 mM
+0.1
-1.1
-0.3
-1.1
+0.3
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.3
-0.8
+0.3
-1.5
-0.3
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.3
-0.8
+0.6
-1.5
-0.3
stress
ALP with Cobalt chloride 0.25 mM
+0.1
-0.7
-0.2
-1.3
+0.5
stress
ALP with perchlorate 6 mM
+0.1
-2.0
-0.3
+1.2
-0.0
stress
ALP with Nickel (II) chloride 2.5 mM
+0.4
-0.3
-0.5
-1.0
+0.6
stress
ALP with perchlorate 12 mM
+0.1
-1.7
-0.2
+2.3
+0.0
stress
ALP with Fusidic 0.02 mg/ml
+0.0
-1.8
+3.8
-0.3
-0.5
stress
ALP with Fusidic 0.007 mg/ml
-0.1
-2.1
+4.3
-0.3
-0.3
stress
ALP with Fusidic 0.01 mg/ml
-0.0
-1.4
+4.2
-0.0
-0.4
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