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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_1458 and Dsui_1459 are separated by 1 nucleotides
Dsui_1459 and Dsui_1460 are separated by 140 nucleotides
Dsui_1460 and Dsui_1461 are separated by 219 nucleotides
Dsui_1461 and Dsui_1462 overlap by 4 nucleotides
Dsui_1458: Dsui_1458 - phosphohistidine phosphatase SixA, at 1,517,360 to 1,517,851
_1458
Dsui_1459: Dsui_1459 - hypothetical protein, at 1,517,853 to 1,519,376
_1459
Dsui_1460: Dsui_1460 - cAMP-binding protein, at 1,519,517 to 1,520,209
_1460
Dsui_1461: Dsui_1461 - RND family efflux transporter, MFP subunit, at 1,520,429 to 1,521,598
_1461
Dsui_1462: Dsui_1462 - ABC-type antimicrobial peptide transport system, ATPase component, at 1,521,595 to 1,522,398
_1462
Group
Condition
Dsui
_1458
Dsui
_1459
Dsui
_1460
Dsui
_1461
Dsui
_1462
anaerobic
Anaero. lactate (C), nitrate electron acceptor
-0.4
-0.0
-5.4
-0.2
-0.1
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
+0.2
-0.6
-5.1
-0.2
-0.3
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.0
-0.0
-4.7
-0.3
-0.6
anaerobic
Anaero. lactate (C), nitrate electron acceptor
+0.1
+0.1
-5.1
-0.2
-0.4
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
+0.4
+0.3
-5.0
-0.5
-0.7
anaerobic
Anaero. lactate (C), nitrate electron acceptor
-0.4
+0.1
-4.2
-0.0
-0.4
anaerobic
Anaero. lactate (C), nitrate electron acceptor
+0.2
-0.2
-5.2
-0.0
+0.4
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
+0.0
-0.1
-4.5
-0.4
+0.3
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
+0.1
+0.3
-4.0
+0.2
+0.2
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
+0.5
+0.4
-4.0
+0.3
-0.0
stress
ALP with copper (II) chloride 0.6 mM
-0.8
-0.0
+0.6
-0.6
-1.7
stress
ALP with nitrite 0.45 mM
-0.7
-0.6
+0.0
-0.0
-1.1
carbon source
D,L-Lactate (C)
-0.3
-0.7
+0.3
-0.4
-1.2
stress
ALP with nitrite 0.15 mM
-0.8
-0.3
+0.4
-0.2
-1.2
carbon source
D-Lactate (C)
-0.4
-0.5
+0.4
-0.3
-1.1
stress
ALP with Cisplatin 0.0009 mg/ml
-0.5
+0.1
+0.5
-0.6
-1.2
stress
ALP with perchlorate 6 mM
-0.2
-0.6
+0.3
-0.2
-1.0
carbon source
pyruvate (C)
-0.4
-0.4
+0.4
-0.1
-1.0
carbon source
D-Lactate (C)
-0.4
-0.5
+0.4
-0.4
-0.6
stress
ALP with Chloride 75 mM
-0.7
-0.7
+0.4
-0.2
-0.2
stress
ALP with Bacitracin 0.2 mg/ml
-1.0
-0.6
+0.5
-0.3
+0.2
carbon source
defined media with 40 mM sodium acetate
+0.2
+0.2
-0.0
-0.1
-1.5
stress
ALP with Zinc 2 mM
-0.8
-0.5
+0.8
-0.3
-0.3
carbon source
propionate (C)
-0.4
-0.7
+0.6
-0.4
+0.3
stress
ALP with Nickel (II) chloride 2.5 mM
-0.1
+0.3
+1.0
-0.3
-1.6
stress
ALP with Dimethyl Sulfoxide 2 vol%
-0.8
-0.3
+0.6
-0.2
+0.3
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.5
+0.1
+0.8
-0.5
+0.5
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
-0.1
+0.2
+1.7
+0.1
-1.1
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.4
+0.2
+1.2
-0.2
+0.7
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.2
+0.3
+0.9
-0.0
+0.7
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