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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_1441 and Dsui_1442 are separated by 154 nucleotides
Dsui_1442 and Dsui_1443 are separated by 96 nucleotides
Dsui_1443 and Dsui_1444 are separated by 233 nucleotides
Dsui_1444 and Dsui_1445 are separated by 51 nucleotides
Dsui_1441: Dsui_1441 - phenylacetate-CoA ligase, at 1,495,219 to 1,496,523
_1441
Dsui_1442: Dsui_1442 - putative efflux protein, MATE family, at 1,496,678 to 1,498,042
_1442
Dsui_1443: Dsui_1443 - phenylacetate-CoA ligase, at 1,498,139 to 1,499,455
_1443
Dsui_1444: Dsui_1444 - Protein of unknown function (DUF2889), at 1,499,689 to 1,500,240
_1444
Dsui_1445: Dsui_1445 - succinyl-CoA synthetase, beta subunit, at 1,500,292 to 1,501,452
_1445
Group
Condition
Dsui
_1441
Dsui
_1442
Dsui
_1443
Dsui
_1444
Dsui
_1445
carbon source
D,L-Lactate (C)
-1.6
-2.3
-1.2
+0.0
-3.7
carbon source
D-Lactate (C)
-0.8
-2.1
-1.1
+0.0
-3.5
carbon source
propionate (C)
-0.7
-2.1
-0.7
-0.0
-3.8
carbon source
pyruvate (C)
-0.7
-2.2
-0.7
-0.0
-3.0
carbon source
a-Ketoglutaric (C)
-0.7
-1.8
-0.8
-0.1
-2.6
carbon source
L-Lactate (C)
-0.5
-2.2
-1.2
+0.1
-2.3
carbon source
a-Ketoglutaric (C)
-1.1
-1.8
-1.0
-0.1
-2.0
carbon source
D,L-Lactate (C)
-0.4
-2.1
-0.4
-0.0
-3.0
carbon source
D-Lactate (C)
-0.6
-2.1
-1.0
+0.1
-2.4
carbon source
pyruvate (C)
-0.6
-2.2
-1.0
+0.1
-1.9
carbon source
L-Lactate (C)
-0.2
-2.1
-1.0
+0.0
-2.3
carbon source
propionate (C)
-0.2
-1.9
-0.7
+0.1
-2.9
stress
ALP with nitrate 50 mM
-1.0
-2.0
-1.2
+0.1
-1.5
stress
ALP with perchlorate 6 mM
-0.2
-2.7
-1.7
-0.1
-0.9
stress
ALP with Bacitracin 0.2 mg/ml
-0.5
-2.6
-1.5
-0.1
-0.7
stress
ALP with Chloride 75 mM
-0.9
-2.6
-1.7
+0.0
-0.1
carbon source
defined media with 30 mM sodium lactate
+0.1
-0.0
-0.2
-0.0
-5.1
stress
ALP with Cisplatin 0.0008 mg/ml
-1.2
-1.6
-1.2
+0.2
-1.4
stress
ALP with Zinc 1 mM
-1.6
-1.9
-1.4
+0.0
-0.2
carbon source
defined media with 30 mM sodium lactate
-0.2
+0.4
-0.9
+0.1
-4.2
stress
ALP with Cisplatin 0.0009 mg/ml
-1.3
-1.6
-0.6
+0.1
-1.3
stress
ALP with Cobalt chloride 0.25 mM
-1.8
-1.6
-1.0
+0.1
-0.3
carbon source
R2A with sodium pyruvate
+0.1
-0.1
-0.3
+0.1
-4.0
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-0.0
-0.4
+0.0
+0.3
-4.1
anaerobic
Anaero. lactate (C), nitrate electron acceptor
+0.1
-1.0
+0.5
+0.1
-3.6
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.2
-1.4
-0.8
+0.5
-2.3
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.1
-1.3
-0.6
+0.5
-2.2
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
+0.1
+0.4
+0.1
+0.2
-4.3
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.2
-1.5
-0.5
+0.8
-1.8
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
+0.4
+0.6
-0.6
+0.4
-3.3
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