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Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_1418 and Dsui_1419 are separated by 7 nucleotides
Dsui_1419 and Dsui_1420 overlap by 4 nucleotides
Dsui_1420 and Dsui_1421 are separated by 39 nucleotides
Dsui_1421 and Dsui_1422 are separated by 1 nucleotides
Dsui_1418: Dsui_1418 - imidazoleglycerol phosphate synthase, cyclase subunit, at 1,473,875 to 1,474,636
_1418
Dsui_1419: Dsui_1419 - phosphoribosyl-AMP cyclohydrolase, at 1,474,644 to 1,475,051
_1419
Dsui_1420: Dsui_1420 - phosphoribosyl-ATP pyrophosphohydrolase, at 1,475,048 to 1,475,371
_1420
Dsui_1421: Dsui_1421 - HIT family hydrolase, diadenosine tetraphosphate hydrolase, at 1,475,411 to 1,475,770
_1421
Dsui_1422: Dsui_1422 - twin arginine-targeting protein translocase, TatA/E family, at 1,475,772 to 1,475,996
_1422
Group
Condition
Dsui
_1418
Dsui
_1419
Dsui
_1420
Dsui
_1421
Dsui
_1422
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
N.D.
N.D.
N.D.
-2.0
N.D.
anaerobic
anaerobic ALP with 3 all (C)s and 5mM perchlorate
N.D.
N.D.
N.D.
-1.2
N.D.
carbon source
R2A with sodium pyruvate
N.D.
N.D.
N.D.
-0.6
N.D.
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
N.D.
N.D.
N.D.
-0.6
N.D.
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
N.D.
N.D.
N.D.
-0.6
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
-0.5
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
-0.5
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
N.D.
N.D.
-0.5
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
-0.4
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
-0.4
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
-0.4
N.D.
anaerobic
Anaero. lactate (C), nitrate electron acceptor
N.D.
N.D.
N.D.
-0.4
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
N.D.
N.D.
-0.4
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
N.D.
N.D.
-0.4
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
N.D.
N.D.
-0.3
N.D.
anaerobic
Anaero. lactate (C), nitrate electron acceptor
N.D.
N.D.
N.D.
-0.3
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
-0.3
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
N.D.
N.D.
-0.3
N.D.
carbon source
defined media with 40 mM sodium acetate
N.D.
N.D.
N.D.
-0.3
N.D.
anaerobic
Anaerobic growth in rich media with perchlorate electron acceptor
N.D.
N.D.
N.D.
-0.3
N.D.
anaerobic
Anaerobic growth in rich media with perchlorate electron acceptor, 1000 uM Stressor (H2S)
N.D.
N.D.
N.D.
-0.3
N.D.
alp rich
rich media
N.D.
N.D.
N.D.
-0.3
N.D.
stress
ALP with Cisplatin 0.0009 mg/ml
N.D.
N.D.
N.D.
+0.3
N.D.
stress
ALP with Thallium(I) acetate 0.002 mg/ml
N.D.
N.D.
N.D.
+0.3
N.D.
stress
ALP with sodium fluoride 30 mM
N.D.
N.D.
N.D.
+0.3
N.D.
stress
ALP with Cisplatin 0.0008 mg/ml
N.D.
N.D.
N.D.
+0.3
N.D.
stress
ALP with Cisplatin 0.0007 mg/ml
N.D.
N.D.
N.D.
+0.4
N.D.
stress
ALP with Zinc 2 mM
N.D.
N.D.
N.D.
+0.4
N.D.
stress
ALP with Cobalt chloride 0.25 mM
N.D.
N.D.
N.D.
+0.4
N.D.
stress
ALP with Nickel (II) chloride 2.5 mM
N.D.
N.D.
N.D.
+0.5
N.D.
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