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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_1404 and Dsui_1405 overlap by 4 nucleotides
Dsui_1405 and Dsui_1406 are separated by 3 nucleotides
Dsui_1406 and Dsui_1407 overlap by 8 nucleotides
Dsui_1407 and Dsui_1408 are separated by 134 nucleotides
Dsui_1404: Dsui_1404 - ABC-type multidrug transport system, ATPase component, at 1,462,832 to 1,463,755
_1404
Dsui_1405: Dsui_1405 - ABC-type polysaccharide/polyol phosphate export systems, permease component, at 1,463,752 to 1,464,507
_1405
Dsui_1406: Dsui_1406 - putative transcriptional regulator, BolA superfamily, at 1,464,511 to 1,464,756
_1406
Dsui_1407: Dsui_1407 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase, at 1,464,749 to 1,466,002
_1407
Dsui_1408: Dsui_1408 - NifZ domain-containing protein, at 1,466,137 to 1,466,406
_1408
Group
Condition
Dsui
_1404
Dsui
_1405
Dsui
_1406
Dsui
_1407
Dsui
_1408
carbon source
propionate (C)
-2.2
-0.0
N.D.
N.D.
-2.4
stress
ALP with Bacitracin 0.2 mg/ml
-1.6
-0.0
N.D.
N.D.
-2.9
carbon source
propionate (C)
-1.5
-0.1
N.D.
N.D.
-2.6
carbon source
D,L-Lactate (C)
-1.2
-0.1
N.D.
N.D.
-2.7
carbon source
D,L-Lactate (C)
-1.3
+0.0
N.D.
N.D.
-2.6
stress
ALP with Fusidic 0.02 mg/ml
-1.2
+0.1
N.D.
N.D.
-2.7
carbon source
D-Lactate (C)
-1.3
-0.1
N.D.
N.D.
-2.5
carbon source
pyruvate (C)
-1.1
+0.0
N.D.
N.D.
-2.6
carbon source
pyruvate (C)
-1.1
-0.0
N.D.
N.D.
-2.5
stress
ALP with Fusidic 0.01 mg/ml
-0.8
-0.2
N.D.
N.D.
-2.7
carbon source
L-Lactate (C)
-1.1
-0.0
N.D.
N.D.
-2.5
carbon source
a-Ketoglutaric (C)
-0.9
-0.3
N.D.
N.D.
-2.3
stress
ALP with Fusidic 0.007 mg/ml
-0.8
+0.1
N.D.
N.D.
-2.7
carbon source
L-Lactate (C)
-0.9
+0.1
N.D.
N.D.
-2.6
stress
ALP with perchlorate 6 mM
-0.5
+0.0
N.D.
N.D.
-2.9
stress
ALP with Cisplatin 0.0007 mg/ml
-2.3
+0.2
N.D.
N.D.
-1.1
stress
ALP with perchlorate 3 mM
-0.5
+0.1
N.D.
N.D.
-2.8
carbon source
D-Lactate (C)
-0.9
+0.1
N.D.
N.D.
-2.5
carbon source
a-Ketoglutaric (C)
-0.9
+0.0
N.D.
N.D.
-2.4
stress
ALP with Cisplatin 0.0009 mg/ml
-2.2
+0.3
N.D.
N.D.
-1.2
stress
ALP with Chloride 75 mM
-0.4
-0.0
N.D.
N.D.
-2.8
stress
ALP with Dimethyl Sulfoxide 2 vol%
-0.5
-0.1
N.D.
N.D.
-2.6
stress
ALP with Cisplatin 0.0008 mg/ml
-2.2
+0.3
N.D.
N.D.
-1.2
stress
ALP with perchlorate 12 mM
-0.4
+0.1
N.D.
N.D.
-2.8
stress
ALP with copper (II) chloride 0.6 mM
-2.4
-0.2
N.D.
N.D.
-0.4
alp richb
ALP
-0.9
+0.0
N.D.
N.D.
-1.3
stress
ALP with Thallium(I) acetate 0.004 mg/ml
-0.7
+0.2
N.D.
N.D.
-1.4
stress
ALP with nitrite 0.15 mM
-0.8
+0.2
N.D.
N.D.
-1.3
stress
ALP with Thallium(I) acetate 0.002 mg/ml
-0.6
+0.3
N.D.
N.D.
-1.4
stress
ALP with nitrate 75 mM
-0.6
+0.3
N.D.
N.D.
-1.3
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