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Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_1376 and Dsui_1377 are separated by 218 nucleotides
Dsui_1377 and Dsui_1378 are separated by 281 nucleotides
Dsui_1378 and Dsui_1379 are separated by 6 nucleotides
Dsui_1379 and Dsui_1380 are separated by 1 nucleotides
Dsui_1376: Dsui_1376 - phasin family protein, at 1,432,931 to 1,433,488
_1376
Dsui_1377: Dsui_1377 - phasin family protein, at 1,433,707 to 1,434,282
_1377
Dsui_1378: Dsui_1378 - enoyl-CoA hydratase/carnithine racemase, at 1,434,564 to 1,435,340
_1378
Dsui_1379: Dsui_1379 - lipopolysaccharide transport periplasmic protein LptA, at 1,435,347 to 1,435,955
_1379
Dsui_1380: Dsui_1380 - hypothetical protein, at 1,435,957 to 1,436,547
_1380
Group
Condition
Dsui
_1376
Dsui
_1377
Dsui
_1378
Dsui
_1379
Dsui
_1380
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
-0.4
-3.2
+0.1
N.D.
N.D.
anaerobic
anaerobic ALP with 3 all (C)s and 5mM perchlorate
+0.0
-3.0
+0.1
N.D.
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.9
-3.6
-0.1
N.D.
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.9
-3.4
-0.1
N.D.
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.3
-1.5
-0.5
N.D.
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.8
-2.7
-0.2
N.D.
N.D.
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
+0.9
-2.7
-0.1
N.D.
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
+0.0
-1.4
-0.3
N.D.
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
+1.0
-2.5
-0.1
N.D.
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.8
-2.2
-0.2
N.D.
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.8
-2.3
-0.0
N.D.
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.9
-2.2
-0.0
N.D.
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.9
-2.2
-0.0
N.D.
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
+0.1
-1.2
-0.2
N.D.
N.D.
stress
ALP with Fusidic 0.007 mg/ml
-0.2
-0.7
-0.3
N.D.
N.D.
anaerobic
Anaero. lactate (C), nitrate electron acceptor
-0.1
-1.0
-0.2
N.D.
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.0
-1.0
-0.2
N.D.
N.D.
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
+0.9
-1.8
-0.2
N.D.
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+1.0
-2.1
-0.1
N.D.
N.D.
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
+0.8
-1.5
-0.2
N.D.
N.D.
stress
ALP with sodium fluoride 40 mM
+0.1
-1.0
+0.2
N.D.
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
+0.3
-1.0
+0.0
N.D.
N.D.
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
+1.0
-1.5
-0.0
N.D.
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
+0.4
-0.9
-0.0
N.D.
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
+0.3
-1.0
+0.2
N.D.
N.D.
stress
ALP with Nickel (II) chloride 3.5 mM
+0.2
+0.8
+0.3
N.D.
N.D.
carbon source
D-Lactate (C)
+0.3
+0.9
+0.1
N.D.
N.D.
carbon source
pyruvate (C)
+0.6
+1.2
+0.2
N.D.
N.D.
stress
ALP with copper (II) chloride 0.6 mM
+0.4
+2.1
+0.2
N.D.
N.D.
stress
ALP with Nickel (II) chloride 2.5 mM
+0.6
+2.1
+0.5
N.D.
N.D.
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