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Cofit
Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_1343 and Dsui_1344 are separated by 127 nucleotides
Dsui_1344 and Dsui_1345 are separated by 11 nucleotides
Dsui_1345 and Dsui_1346 are separated by 70 nucleotides
Dsui_1346 and Dsui_1347 overlap by 4 nucleotides
Dsui_1343: Dsui_1343 - putative hydrolase or acyltransferase of alpha/beta superfamily, at 1,399,826 to 1,400,659
_1343
Dsui_1344: Dsui_1344 - Zn-dependent hydrolase, glyoxylase, at 1,400,787 to 1,401,752
_1344
Dsui_1345: Dsui_1345 - magnesium Mg(2+) and cobalt Co(2+) transport protein CorA, at 1,401,764 to 1,402,837
_1345
Dsui_1346: Dsui_1346 - dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis, at 1,402,908 to 1,403,696
_1346
Dsui_1347: Dsui_1347 - HD-GYP domain-containing protein, at 1,403,693 to 1,404,799
_1347
Group
Condition
Dsui
_1343
Dsui
_1344
Dsui
_1345
Dsui
_1346
Dsui
_1347
stress
ALP with Zinc 2 mM
-0.6
-0.6
-0.6
-0.0
-0.7
stress
ALP with Zinc 1 mM
-0.4
-0.7
-0.5
-0.1
-0.8
carbon source
a-Ketoglutaric (C)
-0.3
-0.8
-0.2
-0.1
-0.4
carbon source
propionate (C)
-0.4
-0.5
-0.2
-0.0
-0.6
stress
ALP with Nickel (II) chloride 1.5 mM
-0.3
-0.5
-0.3
-0.2
-0.5
stress
ALP with Cisplatin 0.0008 mg/ml
-0.3
-0.5
-0.1
-0.3
-0.5
stress
ALP with copper (II) chloride 0.6 mM
-0.4
-0.3
-0.1
-0.6
-0.4
stress
ALP with Chloride 75 mM
-0.3
-0.6
-0.3
-0.0
-0.4
stress
ALP with Cisplatin 0.0007 mg/ml
-0.1
-0.6
+0.0
-0.4
-0.5
stress
ALP with Cobalt chloride 0.25 mM
-0.2
-0.6
-0.2
+0.1
-0.6
carbon source
a-Ketoglutaric (C)
-0.3
-0.6
-0.1
-0.0
-0.5
stress
ALP with perchlorate 12 mM
-0.3
-0.4
-0.3
+0.1
-0.5
stress
ALP with sodium fluoride 40 mM
-0.2
-0.4
+0.1
-0.5
-0.5
stress
ALP with nitrate 50 mM
-0.3
-0.3
-0.2
+0.0
-0.7
stress
ALP with Thallium(I) acetate 0.004 mg/ml
-0.3
-0.3
-0.3
+0.0
-0.6
stress
ALP with Cobalt chloride 0.2 mM
-0.3
-0.2
-0.5
+0.0
-0.5
stress
ALP with Nickel (II) chloride 3.5 mM
-0.4
-0.4
-0.2
+0.2
-0.5
stress
ALP with nitrate 75 mM
-0.3
-0.3
-0.3
+0.1
-0.5
stress
ALP with Thallium(I) acetate 0.003 mg/ml
-0.3
-0.3
-0.3
+0.0
-0.5
stress
ALP with Bacitracin 0.2 mg/ml
-0.3
-0.5
-0.2
+0.0
-0.4
stress
ALP with nitrite 0.3 mM
-0.3
-0.3
-0.3
-0.0
-0.4
alp richb
ALP
-0.3
-0.3
-0.3
+0.1
-0.5
carbon source
propionate (C)
-0.4
-0.4
-0.2
+0.1
-0.2
stress
ALP with perchlorate 6 mM
-0.4
-0.4
-0.2
+0.0
-0.3
carbon source
D,L-Lactate (C)
-0.4
-0.5
-0.3
+0.1
-0.2
carbon source
pyruvate (C)
-0.3
-0.3
-0.4
+0.1
-0.3
carbon source
L-Lactate (C)
-0.2
-0.6
+0.2
-0.0
-0.5
carbon source
D-Lactate (C)
-0.3
-0.4
+0.1
+0.1
-0.6
stress
ALP with Fusidic 0.007 mg/ml
-0.1
+0.2
-0.1
+0.8
-0.2
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
+0.5
+0.3
+0.5
+0.2
+0.3
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