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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_1332 and Dsui_1333 are separated by 20 nucleotides
Dsui_1333 and Dsui_1334 are separated by 44 nucleotides
Dsui_1334 and Dsui_1335 are separated by 69 nucleotides
Dsui_1335 and Dsui_1336 are separated by 586 nucleotides
Dsui_1332: Dsui_1332 - hypothetical protein, at 1,389,961 to 1,390,722
_1332
Dsui_1333: Dsui_1333 - Integral membrane protein CcmA involved in cell shape determination, at 1,390,743 to 1,391,153
_1333
Dsui_1334: Dsui_1334 - Iron-sulfur cluster assembly accessory protein, at 1,391,198 to 1,391,545
_1334
Dsui_1335: Dsui_1335 - metalloendopeptidase-like membrane protein, at 1,391,615 to 1,392,967
_1335
Dsui_1336: Dsui_1336 - 16S ribosomal RNA, at 1,393,554 to 1,394,975
_1336
Group
Condition
Dsui
_1332
Dsui
_1333
Dsui
_1334
Dsui
_1335
Dsui
_1336
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.4
-0.6
N.D.
-1.0
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.3
-0.5
N.D.
-0.9
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.4
-0.6
N.D.
-0.9
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.3
-0.5
N.D.
-0.9
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.2
-0.4
N.D.
-0.8
N.D.
alp rich
rich media
-0.4
-0.4
N.D.
-0.4
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.2
-0.4
N.D.
-0.6
N.D.
alp rich
rich media
-0.3
-0.4
N.D.
-0.4
N.D.
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
-0.2
-0.3
N.D.
-0.6
N.D.
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-0.1
-0.4
N.D.
-0.6
N.D.
stress
ALP with nitrate 75 mM
-0.2
-0.0
N.D.
-0.9
N.D.
stress
rich media with hydrogen peroxide 5 mM
-0.4
-0.3
N.D.
-0.4
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.1
-0.3
N.D.
-0.6
N.D.
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-0.1
-0.4
N.D.
-0.5
N.D.
stress
rich media with sodium chlorite 0.16 mM
-0.3
-0.3
N.D.
-0.2
N.D.
carbon source
defined media with 30 mM sodium lactate
-0.3
-0.3
N.D.
-0.3
N.D.
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
+0.3
+0.5
N.D.
-1.2
N.D.
carbon source
D,L-Lactate (C)
+0.3
+0.4
N.D.
+0.1
N.D.
stress
ALP with Cisplatin 0.0007 mg/ml
+0.1
+0.3
N.D.
+0.4
N.D.
carbon source
propionate (C)
+0.3
+0.4
N.D.
+0.2
N.D.
carbon source
D-Lactate (C)
+0.4
+0.4
N.D.
+0.1
N.D.
carbon source
L-Lactate (C)
+0.3
+0.4
N.D.
+0.2
N.D.
carbon source
propionate (C)
+0.3
+0.5
N.D.
+0.2
N.D.
carbon source
D-Lactate (C)
+0.4
+0.4
N.D.
+0.2
N.D.
carbon source
pyruvate (C)
+0.3
+0.4
N.D.
+0.2
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
+0.3
+0.1
N.D.
+0.6
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
+0.2
+0.2
N.D.
+0.6
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
+0.3
+0.1
N.D.
+0.6
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
+0.3
+0.2
N.D.
+0.6
N.D.
stress
ALP with Nickel (II) chloride 2.5 mM
+0.4
+0.6
N.D.
+0.5
N.D.
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