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Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_1322 and Dsui_1323 are separated by 317 nucleotides
Dsui_1323 and Dsui_1324 overlap by 13 nucleotides
Dsui_1324 and Dsui_1325 are separated by 159 nucleotides
Dsui_1325 and Dsui_1326 are separated by 54 nucleotides
Dsui_1322: Dsui_1322 - signal recognition particle protein, at 1,381,400 to 1,382,755
_1322
Dsui_1323: Dsui_1323 - soluble lytic murein transglycosylase-like protein, at 1,383,073 to 1,383,681
_1323
Dsui_1324: Dsui_1324 - prolyl-tRNA synthetase, family II, at 1,383,669 to 1,385,381
_1324
Dsui_1325: Dsui_1325 - ADP-ribose pyrophosphatase, at 1,385,541 to 1,386,065
_1325
Dsui_1326: Dsui_1326 - putative signal-transduction protein containing cAMP-binding and CBS domains, at 1,386,120 to 1,386,731
_1326
Group
Condition
Dsui
_1322
Dsui
_1323
Dsui
_1324
Dsui
_1325
Dsui
_1326
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-0.9
N.D.
-3.3
-0.4
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-1.0
N.D.
-3.1
-0.3
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
N.D.
-0.4
N.D.
-3.3
-0.3
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-1.1
N.D.
-2.2
-0.6
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-0.7
N.D.
-3.2
+0.1
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-1.0
N.D.
-2.3
-0.4
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
-1.1
N.D.
-2.1
-0.6
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
-1.1
N.D.
-2.0
-0.6
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
-1.1
N.D.
-1.6
-0.5
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-0.6
N.D.
-2.2
-0.1
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
N.D.
-0.7
N.D.
-1.9
-0.3
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
N.D.
-0.8
N.D.
-1.4
-0.2
stress
rich media with hydrogen peroxide 5 mM
N.D.
-0.4
N.D.
-1.7
-0.3
alp rich
rich media
N.D.
-0.2
N.D.
-1.5
-0.4
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
+0.1
N.D.
-2.2
+0.1
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
-0.0
N.D.
-1.8
-0.1
alp rich
rich media
N.D.
-0.3
N.D.
-1.0
-0.4
stress
ALP with nitrite 0.15 mM
N.D.
-0.2
N.D.
-1.5
+0.0
alp rich
rich media
N.D.
+0.0
N.D.
-1.4
-0.3
stress
ALP with nitrate 75 mM
N.D.
-0.2
N.D.
-1.5
+0.1
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
+0.0
N.D.
-1.6
-0.0
carbon source
defined media with 30 mM sodium lactate
N.D.
-0.3
N.D.
-1.1
-0.2
stress
ALP with Nickel (II) chloride 3.5 mM
N.D.
-0.1
N.D.
-1.5
+0.1
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
N.D.
-0.6
N.D.
-0.8
+0.1
stress
ALP with Nickel (II) chloride 2.5 mM
N.D.
+0.1
N.D.
-1.5
+0.4
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
-1.2
N.D.
+0.5
+0.1
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
-1.0
N.D.
+0.7
+0.0
stress
ALP with Fusidic 0.02 mg/ml
N.D.
+0.0
N.D.
+2.9
+0.2
stress
ALP with Fusidic 0.01 mg/ml
N.D.
+0.1
N.D.
+3.0
+0.3
stress
ALP with Fusidic 0.007 mg/ml
N.D.
+0.2
N.D.
+4.2
+0.2
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