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Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_1295 and Dsui_1296 are separated by 21 nucleotides
Dsui_1296 and Dsui_1297 are separated by 85 nucleotides
Dsui_1297 and Dsui_1298 are separated by 5 nucleotides
Dsui_1298 and Dsui_1299 are separated by 69 nucleotides
Dsui_1295: Dsui_1295 - lipid A core-O-antigen ligase-like enyme, at 1,357,876 to 1,359,690
_1295
Dsui_1296: Dsui_1296 - putative amidophosphoribosyltransferase, at 1,359,712 to 1,360,437
_1296
Dsui_1297: Dsui_1297 - biotin synthetase, at 1,360,523 to 1,361,530
_1297
Dsui_1298: Dsui_1298 - methylase involved in ubiquinone/menaquinone biosynthesis, at 1,361,536 to 1,362,438
_1298
Dsui_1299: Dsui_1299 - putative membrane protein, at 1,362,508 to 1,363,209
_1299
Group
Condition
Dsui
_1295
Dsui
_1296
Dsui
_1297
Dsui
_1298
Dsui
_1299
carbon source
propionate (C)
-0.8
-1.8
-5.0
N.D.
-0.1
carbon source
propionate (C)
-0.7
-1.6
-3.7
N.D.
-0.1
carbon source
pyruvate (C)
-0.9
-1.9
-2.7
N.D.
-0.1
carbon source
L-Lactate (C)
-0.9
-2.0
-2.1
N.D.
-0.6
carbon source
D,L-Lactate (C)
-0.9
-1.7
-2.6
N.D.
-0.3
carbon source
D,L-Lactate (C)
-1.0
-2.1
-2.4
N.D.
+0.1
carbon source
D-Lactate (C)
-0.8
-1.8
-2.6
N.D.
-0.2
carbon source
pyruvate (C)
-0.9
-1.9
-2.4
N.D.
+0.0
carbon source
L-Lactate (C)
-0.8
-1.8
-2.2
N.D.
+0.0
carbon source
D-Lactate (C)
-0.9
-1.8
-1.5
N.D.
-0.2
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
-0.6
-0.5
-1.9
N.D.
-1.2
stress
ALP with perchlorate 6 mM
-1.4
-2.3
-0.1
N.D.
-0.3
stress
ALP with perchlorate 3 mM
-1.3
-2.4
-0.2
N.D.
-0.1
stress
ALP with Bacitracin 0.2 mg/ml
-1.3
-2.3
+0.0
N.D.
-0.2
stress
ALP with perchlorate 12 mM
-1.3
-2.3
+0.4
N.D.
-0.3
stress
ALP with Thallium(I) acetate 0.002 mg/ml
-1.4
-1.6
-0.0
N.D.
-0.4
stress
ALP with Chloride 75 mM
-1.3
-1.9
+0.2
N.D.
-0.3
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-1.6
-0.3
-0.4
N.D.
-1.0
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-1.4
-0.6
-0.2
N.D.
-1.1
No stressor control+ 10 mM ClO4 and 20 mM lactate
-1.6
-0.7
-0.1
N.D.
-0.9
stress
ALP with Dimethyl Sulfoxide 2 vol%
-1.1
-2.0
+0.2
N.D.
-0.2
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-1.5
-0.7
+0.2
N.D.
-1.1
stress
ALP with nitrite 0.45 mM
-1.3
-1.4
+0.2
N.D.
-0.5
stress
ALP with nitrite 0.3 mM
-1.3
-1.4
+0.2
N.D.
-0.4
stress
ALP with nitrite 0.15 mM
-1.3
-1.4
+0.4
N.D.
-0.4
stress
ALP with Fusidic 0.02 mg/ml
-1.1
-2.1
+0.7
N.D.
-0.1
stress
ALP with Thallium(I) acetate 0.004 mg/ml
-1.5
-1.6
+0.4
N.D.
+0.0
stress
ALP with Fusidic 0.007 mg/ml
-1.2
-1.9
+0.6
N.D.
-0.0
stress
ALP with Fusidic 0.01 mg/ml
-1.1
-1.8
+0.7
N.D.
-0.0
stress
ALP with copper (II) chloride 0.6 mM
+0.2
+0.5
+2.5
N.D.
+0.5
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