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Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_1270 and Dsui_1271 are separated by 10 nucleotides
Dsui_1271 and Dsui_1272 are separated by 357 nucleotides
Dsui_1272 and Dsui_1273 are separated by 75 nucleotides
Dsui_1273 and Dsui_1274 are separated by 10 nucleotides
Dsui_1270: Dsui_1270 - C-terminal processing peptidase, at 1,332,951 to 1,334,354
_1270
Dsui_1271: Dsui_1271 - membrane-bound metallopeptidase, at 1,334,365 to 1,335,825
_1271
Dsui_1272: Dsui_1272 - putative transcriptional regulator, at 1,336,183 to 1,336,509
_1272
Dsui_1273: Dsui_1273 - Rhodanese-related sulfurtransferase, at 1,336,585 to 1,336,998
_1273
Dsui_1274: Dsui_1274 - Glutaredoxin, GrxC family, at 1,337,009 to 1,337,275
_1274
Group
Condition
Dsui
_1270
Dsui
_1271
Dsui
_1272
Dsui
_1273
Dsui
_1274
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
-1.4
-0.6
-0.5
-0.2
stress
ALP with Cisplatin 0.0009 mg/ml
N.D.
-1.2
-0.4
-1.0
+0.0
stress
ALP with Cisplatin 0.0008 mg/ml
N.D.
-1.4
-0.2
-0.7
+0.0
stress
ALP with Cisplatin 0.0007 mg/ml
N.D.
-1.6
-0.2
-0.7
+0.2
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
-1.5
-0.5
-0.2
+0.1
anaerobic
anaerobic ALP with 3 all (C)s and 5mM perchlorate
N.D.
-1.1
-0.8
-0.3
+0.3
stress
ALP with Cobalt chloride 0.25 mM
N.D.
-0.3
+0.2
-1.4
-0.4
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
-1.3
-0.6
-0.1
+0.3
stress
ALP with copper (II) chloride 0.6 mM
N.D.
-1.4
-0.4
-0.0
+0.4
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
-1.3
-0.6
+0.1
+0.6
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
-1.3
-0.4
+0.1
+0.8
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
N.D.
-1.2
-0.2
+0.4
+0.4
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
-1.7
+0.6
+0.1
+0.5
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-1.4
+0.4
-0.2
+1.0
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
-1.0
+0.2
-0.2
+1.2
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
-1.2
+0.2
+0.0
+1.2
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
-1.1
+0.2
-0.1
+1.3
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-0.9
+0.7
-0.4
+1.0
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-1.1
+0.5
+0.2
+1.0
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-1.1
+0.6
-0.1
+1.1
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
-1.2
+0.7
+0.4
+0.7
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-1.3
+0.8
-0.2
+1.3
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
N.D.
-1.1
+0.3
+0.3
+1.2
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
-1.2
+0.9
+0.5
+0.7
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
-1.1
+0.8
+0.4
+0.8
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
N.D.
-0.8
+0.3
+0.2
+1.3
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
N.D.
-1.4
+0.6
+0.3
+1.6
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-1.1
+0.9
+0.0
+1.2
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
N.D.
-0.8
+0.2
+0.4
+1.4
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
N.D.
-0.0
+0.2
+1.3
+0.8
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