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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_1247 and Dsui_1248 are separated by 190 nucleotides
Dsui_1248 and Dsui_1249 are separated by 71 nucleotides
Dsui_1249 and Dsui_1250 overlap by 4 nucleotides
Dsui_1250 and Dsui_1251 overlap by 8 nucleotides
Dsui_1247: Dsui_1247 - ATPase involved in chromosome partitioning, at 1,308,509 to 1,309,603
_1247
Dsui_1248: Dsui_1248 - protein containing C-terminal region/beta chain of methionyl-tRNA synthetase, at 1,309,794 to 1,311,923
_1248
Dsui_1249: Dsui_1249 - hypothetical protein, at 1,311,995 to 1,312,267
_1249
Dsui_1250: Dsui_1250 - sulfate permease-like transporter, MFS superfamily, at 1,312,264 to 1,313,931
_1250
Dsui_1251: Dsui_1251 - acylphosphatase, at 1,313,924 to 1,314,211
_1251
Group
Condition
Dsui
_1247
Dsui
_1248
Dsui
_1249
Dsui
_1250
Dsui
_1251
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-4.9
+0.4
-0.1
+0.5
stress
ALP with Cisplatin 0.0008 mg/ml
N.D.
-0.6
-1.8
-0.2
-1.4
carbon source
R2A with sodium pyruvate
N.D.
-0.6
-0.1
+0.1
-2.7
stress
ALP with Cisplatin 0.0009 mg/ml
N.D.
-0.9
-1.8
-0.4
+0.1
carbon source
D,L-Lactate (C)
N.D.
-0.8
+0.0
-0.2
-1.7
carbon source
pyruvate (C)
N.D.
-0.4
-0.1
-0.3
-1.6
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
N.D.
+0.3
-0.2
-2.3
-0.2
stress
ALP with Cisplatin 0.0007 mg/ml
N.D.
-0.9
-1.6
+0.1
+0.0
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
N.D.
+0.3
-0.1
-2.3
-0.2
stress
ALP with copper (II) chloride 0.6 mM
N.D.
-0.8
-0.7
-0.5
-0.2
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
-0.7
+0.2
-0.1
-1.6
stress
ALP with Cobalt chloride 0.25 mM
N.D.
-0.4
-0.2
-0.3
-1.4
stress
ALP with Thallium(I) acetate 0.003 mg/ml
N.D.
-0.3
-0.3
-0.4
-1.1
carbon source
R2A with sodium pyruvate
N.D.
-1.5
+0.2
-0.1
-0.6
carbon source
L-Lactate (C)
N.D.
-0.3
+0.1
-0.2
-1.6
stress
ALP with nitrite 0.45 mM
N.D.
+0.1
-0.1
-0.2
-1.6
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
N.D.
-2.2
+0.4
+0.0
+0.1
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
-2.3
+0.5
-0.1
+0.1
stress
ALP with Fusidic 0.01 mg/ml
N.D.
+0.3
-0.4
+0.2
-1.7
stress
ALP with Bacitracin 0.2 mg/ml
N.D.
+0.2
-0.3
-0.3
-1.2
carbon source
propionate (C)
N.D.
+0.3
+0.0
-0.3
-1.5
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
N.D.
-2.1
+0.4
+0.1
+0.3
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-1.6
+0.5
-0.2
+0.0
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
-1.8
+0.5
-0.2
+0.2
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
+0.9
-0.4
-0.1
-1.5
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-1.3
+0.5
-0.4
+0.0
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-1.5
+0.5
-0.2
+0.0
carbon source
R2A with sodium pyruvate
N.D.
-1.9
+0.0
+0.2
+0.8
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-1.0
+0.5
-0.3
+0.3
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
N.D.
-0.9
+0.7
-0.0
+0.3
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