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Cofit
Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_1234 and Dsui_1235 are separated by 77 nucleotides
Dsui_1235 and Dsui_1236 overlap by 4 nucleotides
Dsui_1236 and Dsui_1237 are separated by 8 nucleotides
Dsui_1237 and Dsui_1238 are separated by 242 nucleotides
Dsui_1234: Dsui_1234 - putative Zn-dependent protease-like protein, at 1,292,261 to 1,293,655
_1234
Dsui_1235: Dsui_1235 - hypothetical protein, at 1,293,733 to 1,294,290
_1235
Dsui_1236: Dsui_1236 - molybdenum cofactor synthesis domain protein, at 1,294,287 to 1,294,880
_1236
Dsui_1237: Dsui_1237 - hypothetical protein, at 1,294,889 to 1,296,406
_1237
Dsui_1238: Dsui_1238 - thymidylate synthase, at 1,296,649 to 1,297,443
_1238
Group
Condition
Dsui
_1234
Dsui
_1235
Dsui
_1236
Dsui
_1237
Dsui
_1238
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.9
-2.3
-9.1
-0.2
N.D.
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-0.9
-2.0
-7.2
+0.2
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.5
-2.1
-7.3
-0.1
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.6
-2.2
-6.9
-0.1
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.4
-2.2
-6.8
+0.0
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.4
-1.7
-7.1
-0.2
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.5
-2.0
-6.7
-0.0
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.3
-2.6
-5.7
-0.1
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.5
-1.8
-6.0
-0.1
N.D.
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-0.7
-2.0
-5.3
-0.2
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.3
-2.1
-5.8
+0.1
N.D.
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
-0.4
-4.0
-3.2
-0.1
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
+0.2
-3.2
-2.3
+0.1
N.D.
anaerobic
anaerobic ALP with 3 all (C)s and 5mM perchlorate
-0.2
-1.3
-3.2
-0.3
N.D.
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
-0.2
-1.3
-3.3
+0.0
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
+0.2
-2.6
-2.6
+0.3
N.D.
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
+0.2
-1.1
-3.3
-0.2
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
+0.2
-3.0
-1.8
+0.3
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
+0.1
-1.8
-2.2
-0.1
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
+0.2
-2.2
-2.0
+0.1
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.0
-0.8
-2.9
-0.2
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
+0.3
-2.3
-2.0
+0.3
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
+0.2
-1.7
-2.4
+0.1
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
+0.2
-1.7
-2.3
+0.1
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
+0.2
-2.1
-1.6
-0.0
N.D.
stress
ALP with Cisplatin 0.0009 mg/ml
-3.0
+0.1
+0.0
-0.5
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
+0.2
-1.3
-2.1
-0.2
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
+0.3
-1.4
-2.1
+0.2
N.D.
stress
ALP with Fusidic 0.007 mg/ml
+0.5
+2.6
-0.1
-0.2
N.D.
stress
ALP with Fusidic 0.01 mg/ml
+0.7
+2.6
-0.2
+0.4
N.D.
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