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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_1220 and Dsui_1221 are separated by 163 nucleotides
Dsui_1221 and Dsui_1222 are separated by 45 nucleotides
Dsui_1222 and Dsui_1223 are separated by 4 nucleotides
Dsui_1223 and Dsui_1224 are separated by 10 nucleotides
Dsui_1220: Dsui_1220 - gamma-glutamyl phosphate reductase, at 1,275,398 to 1,276,654
_1220
Dsui_1221: Dsui_1221 - hypothetical protein, at 1,276,818 to 1,277,090
_1221
Dsui_1222: Dsui_1222 - DNA polymerase III, delta subunit, at 1,277,136 to 1,278,137
_1222
Dsui_1223: Dsui_1223 - Rare lipoprotein B, at 1,278,142 to 1,278,648
_1223
Dsui_1224: Dsui_1224 - leucyl-tRNA synthetase, at 1,278,659 to 1,281,328
_1224
Group
Condition
Dsui
_1220
Dsui
_1221
Dsui
_1222
Dsui
_1223
Dsui
_1224
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-9.2
N.D.
N.D.
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-9.2
N.D.
N.D.
N.D.
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
N.D.
-9.2
N.D.
N.D.
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-7.7
N.D.
N.D.
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-6.9
N.D.
N.D.
N.D.
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
N.D.
-6.4
N.D.
N.D.
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-5.9
N.D.
N.D.
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-5.6
N.D.
N.D.
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
-5.6
N.D.
N.D.
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
-5.5
N.D.
N.D.
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
-5.1
N.D.
N.D.
N.D.
anaerobic
anaerobic ALP with 3 all (C)s and 5mM perchlorate
N.D.
-3.3
N.D.
N.D.
N.D.
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
N.D.
-3.2
N.D.
N.D.
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
-2.9
N.D.
N.D.
N.D.
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
N.D.
-2.8
N.D.
N.D.
N.D.
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
N.D.
-2.5
N.D.
N.D.
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
-2.2
N.D.
N.D.
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
-2.0
N.D.
N.D.
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
-1.8
N.D.
N.D.
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
-1.8
N.D.
N.D.
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
-1.7
N.D.
N.D.
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
-1.4
N.D.
N.D.
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
-1.4
N.D.
N.D.
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
-1.3
N.D.
N.D.
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
-1.2
N.D.
N.D.
N.D.
anaerobic
Anaero. lactate (C), nitrate electron acceptor
N.D.
-1.1
N.D.
N.D.
N.D.
carbon source
defined media with 30 mM sodium lactate
N.D.
-1.1
N.D.
N.D.
N.D.
anaerobic
Anaero. lactate (C), nitrate electron acceptor
N.D.
-1.1
N.D.
N.D.
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
-1.1
N.D.
N.D.
N.D.
stress
ALP with copper (II) chloride 0.6 mM
N.D.
+0.9
N.D.
N.D.
N.D.
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