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Fitness for 5 genes in
Dechlorosoma suillum PS
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_1200 and Dsui_1201 are separated by 22 nucleotides
Dsui_1201 and Dsui_1202 are separated by 4 nucleotides
Dsui_1202 and Dsui_1203 overlap by 23 nucleotides
Dsui_1203 and Dsui_1204 are separated by 23 nucleotides
Dsui_1200: Dsui_1200 - glycyl-tRNA synthetase, tetrameric type, beta subunit, at 1,252,378 to 1,254,621
_1200
Dsui_1201: Dsui_1201 - histidinol-phosphate phosphatase family protein, at 1,254,644 to 1,255,192
_1201
Dsui_1202: Dsui_1202 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 1,255,197 to 1,255,940
_1202
Dsui_1203: Dsui_1203 - putative metal-dependent hydrolase, at 1,255,918 to 1,256,694
_1203
Dsui_1204: Dsui_1204 - lactoylglutathione lyase, at 1,256,718 to 1,257,104
_1204
Group
Condition
Dsui
_1200
Dsui
_1201
Dsui
_1202
Dsui
_1203
Dsui
_1204
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
N.D.
N.D.
-0.9
-0.7
stress
rich media with sodium chlorite 0.16 mM
N.D.
N.D.
N.D.
-0.6
-0.3
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
N.D.
N.D.
-0.7
-0.2
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
N.D.
N.D.
-0.7
-0.2
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
N.D.
N.D.
-0.4
-0.5
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
N.D.
N.D.
-0.6
-0.2
stress
ALP with perchlorate 12 mM
N.D.
N.D.
N.D.
-0.5
-0.3
alp rich
rich media
N.D.
N.D.
N.D.
-0.4
-0.4
carbon source
defined media with 30 mM sodium lactate
N.D.
N.D.
N.D.
-0.2
-0.6
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
N.D.
N.D.
-0.4
-0.3
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
N.D.
N.D.
-0.3
-0.4
stress
ALP with Bacitracin 0.2 mg/ml
N.D.
N.D.
N.D.
-0.5
-0.1
stress
ALP with Fusidic 0.02 mg/ml
N.D.
N.D.
N.D.
-0.3
-0.4
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
N.D.
N.D.
-0.5
-0.1
stress
ALP with perchlorate 6 mM
N.D.
N.D.
N.D.
-0.4
-0.2
ALP with 3 all (C)s
N.D.
N.D.
N.D.
+0.0
-0.6
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
-0.6
+0.3
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
-0.6
+0.5
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
-0.3
+0.5
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
-0.3
+0.5
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
N.D.
N.D.
N.D.
-0.4
+0.6
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
N.D.
N.D.
N.D.
-0.4
+0.6
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
-0.2
+0.5
stress
ALP with copper (II) chloride 0.6 mM
N.D.
N.D.
N.D.
+0.6
-0.2
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
-0.2
+0.6
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
-0.2
+0.6
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
-0.1
+0.7
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
-0.1
+0.7
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
-0.1
+0.7
stress
ALP with Nickel (II) chloride 2.5 mM
N.D.
N.D.
N.D.
+0.7
+0.7
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