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Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_1199 and Dsui_1200 are separated by 2 nucleotides
Dsui_1200 and Dsui_1201 are separated by 22 nucleotides
Dsui_1201 and Dsui_1202 are separated by 4 nucleotides
Dsui_1202 and Dsui_1203 overlap by 23 nucleotides
Dsui_1199: Dsui_1199 - glycyl-tRNA synthetase, tetrameric type, alpha subunit, at 1,251,446 to 1,252,375
_1199
Dsui_1200: Dsui_1200 - glycyl-tRNA synthetase, tetrameric type, beta subunit, at 1,252,378 to 1,254,621
_1200
Dsui_1201: Dsui_1201 - histidinol-phosphate phosphatase family protein, at 1,254,644 to 1,255,192
_1201
Dsui_1202: Dsui_1202 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 1,255,197 to 1,255,940
_1202
Dsui_1203: Dsui_1203 - putative metal-dependent hydrolase, at 1,255,918 to 1,256,694
_1203
Group
Condition
Dsui
_1199
Dsui
_1200
Dsui
_1201
Dsui
_1202
Dsui
_1203
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
N.D.
N.D.
N.D.
-0.9
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
N.D.
N.D.
N.D.
-0.7
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
N.D.
N.D.
N.D.
-0.7
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
N.D.
N.D.
N.D.
-0.6
stress
rich media with sodium chlorite 0.16 mM
N.D.
N.D.
N.D.
N.D.
-0.6
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
N.D.
-0.6
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
N.D.
-0.6
stress
ALP with perchlorate 12 mM
N.D.
N.D.
N.D.
N.D.
-0.5
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
N.D.
N.D.
N.D.
-0.5
stress
ALP with Bacitracin 0.2 mg/ml
N.D.
N.D.
N.D.
N.D.
-0.5
stress
ALP with perchlorate 3 mM
N.D.
N.D.
N.D.
N.D.
-0.5
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
N.D.
N.D.
N.D.
N.D.
-0.5
carbon source
D,L-Lactate (C)
N.D.
N.D.
N.D.
N.D.
-0.4
carbon source
L-Lactate (C)
N.D.
N.D.
N.D.
N.D.
-0.4
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
N.D.
N.D.
N.D.
N.D.
-0.4
carbon source
D-Lactate (C)
N.D.
N.D.
N.D.
N.D.
-0.4
alp rich
rich media
N.D.
N.D.
N.D.
N.D.
-0.4
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
N.D.
N.D.
N.D.
-0.4
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
N.D.
N.D.
N.D.
-0.4
carbon source
a-Ketoglutaric (C)
N.D.
N.D.
N.D.
N.D.
-0.4
stress
ALP with perchlorate 6 mM
N.D.
N.D.
N.D.
N.D.
-0.4
stress
ALP with Fusidic 0.01 mg/ml
N.D.
N.D.
N.D.
N.D.
-0.4
carbon source
propionate (C)
N.D.
N.D.
N.D.
N.D.
-0.4
anaerobic
Anaero. lactate (C), nitrate electron acceptor
N.D.
N.D.
N.D.
N.D.
-0.4
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
N.D.
N.D.
N.D.
-0.4
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
N.D.
N.D.
N.D.
N.D.
-0.4
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
N.D.
-0.3
anaerobic
Anaerobic growth in rich media with perchlorate electron acceptor, 1000 uM Stressor (H2S)
N.D.
N.D.
N.D.
N.D.
-0.3
stress
ALP with copper (II) chloride 0.6 mM
N.D.
N.D.
N.D.
N.D.
+0.6
stress
ALP with Nickel (II) chloride 2.5 mM
N.D.
N.D.
N.D.
N.D.
+0.7
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