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Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_1152 and Dsui_1153 overlap by 4 nucleotides
Dsui_1153 and Dsui_1154 are separated by 139 nucleotides
Dsui_1154 and Dsui_1155 are separated by 6 nucleotides
Dsui_1155 and Dsui_1156 are separated by 51 nucleotides
Dsui_1152: Dsui_1152 - Ni,Fe-hydrogenase I large subunit, at 1,206,546 to 1,208,006
_1152
Dsui_1153: Dsui_1153 - Ni,Fe-hydrogenase I small subunit, at 1,208,003 to 1,208,998
_1153
Dsui_1154: Dsui_1154 - response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 1,209,138 to 1,210,613
_1154
Dsui_1155: Dsui_1155 - methionyl-tRNA formyltransferase, at 1,210,620 to 1,212,353
_1155
Dsui_1156: Dsui_1156 - putative divalent heavy-metal cations transporter, at 1,212,405 to 1,213,310
_1156
Group
Condition
Dsui
_1152
Dsui
_1153
Dsui
_1154
Dsui
_1155
Dsui
_1156
stress
ALP with copper (II) chloride 0.6 mM
-1.4
+0.0
-0.8
-0.4
N.D.
stress
ALP with Cisplatin 0.0007 mg/ml
-0.5
-0.8
-0.6
-0.3
N.D.
stress
ALP with Zinc 2 mM
-0.5
-0.3
-0.5
-0.8
N.D.
stress
ALP with Nickel (II) chloride 3.5 mM
-1.0
-0.4
-0.2
-0.3
N.D.
stress
ALP with Zinc 1 mM
-0.9
-0.4
-0.4
-0.2
N.D.
stress
ALP with Thallium(I) acetate 0.003 mg/ml
-0.8
-0.2
-0.4
-0.2
N.D.
stress
ALP with nitrate 75 mM
-0.7
-0.4
-0.4
-0.2
N.D.
stress
ALP with Nickel (II) chloride 1.5 mM
-0.3
-0.1
-0.5
-0.7
N.D.
carbon source
pyruvate (C)
-0.8
-0.3
-0.0
-0.5
N.D.
stress
ALP with nitrite 0.3 mM
-0.4
-0.6
-0.3
-0.2
N.D.
stress
ALP with Cobalt chloride 0.25 mM
-0.6
-0.1
-0.5
-0.3
N.D.
stress
ALP with Thallium(I) acetate 0.004 mg/ml
-0.4
-0.4
-0.5
-0.2
N.D.
stress
ALP with Thallium(I) acetate 0.002 mg/ml
-0.6
-0.3
-0.4
-0.2
N.D.
alp richb
ALP
-0.4
-0.4
-0.5
-0.0
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.6
-0.4
-0.1
-0.4
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.1
-0.7
-0.3
-0.3
N.D.
carbon source
propionate (C)
-0.2
-0.2
-0.4
-0.4
N.D.
carbon source
R2A with sodium pyruvate
+0.4
-0.6
-0.2
-0.2
N.D.
carbon source
R2A with sodium pyruvate
+0.7
+0.4
-0.2
-0.2
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.6
+0.3
+0.2
+0.2
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
+0.5
+0.1
+0.3
+0.4
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
+0.6
+0.2
+0.3
+0.3
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
+0.5
+0.3
+0.4
+0.3
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
+0.6
+0.1
+0.5
+0.3
N.D.
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
+0.6
+0.3
+0.2
+0.4
N.D.
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
+0.7
+0.4
+0.3
+0.3
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.7
+0.3
+0.3
+0.3
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.6
+0.4
+0.4
+0.4
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.7
+0.5
+0.3
+0.3
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.8
+0.4
+0.4
+0.4
N.D.
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