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Cofit
Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_1135 and Dsui_1136 are separated by 95 nucleotides
Dsui_1136 and Dsui_1137 overlap by 4 nucleotides
Dsui_1137 and Dsui_1138 overlap by 4 nucleotides
Dsui_1138 and Dsui_1139 overlap by 4 nucleotides
Dsui_1135: Dsui_1135 - flagellar basal-body rod protein FlgB, at 1,188,825 to 1,189,229
_1135
Dsui_1136: Dsui_1136 - hypothetical protein, at 1,189,325 to 1,190,263
_1136
Dsui_1137: Dsui_1137 - chromate transporter, chromate ion transporter family, at 1,190,260 to 1,191,624
_1137
Dsui_1138: Dsui_1138 - hypothetical protein, at 1,191,621 to 1,192,016
_1138
Dsui_1139: Dsui_1139 - hypothetical protein, at 1,192,013 to 1,192,468
_1139
Group
Condition
Dsui
_1135
Dsui
_1136
Dsui
_1137
Dsui
_1138
Dsui
_1139
stress
ALP with nitrite 0.15 mM
-1.1
+0.0
-0.8
-1.4
-0.9
stress
ALP with nitrate 75 mM
-1.1
+0.1
-1.0
-1.2
-0.9
stress
ALP with nitrite 0.45 mM
-1.0
+0.2
-1.0
-1.0
-0.8
stress
ALP with sodium fluoride 30 mM
-0.9
+0.2
-1.5
-0.8
-0.7
stress
ALP with Cisplatin 0.0008 mg/ml
-0.9
-0.2
-0.8
-1.1
-0.6
stress
ALP with Zinc 1 mM
-1.1
+0.2
-0.7
-0.9
-0.9
stress
ALP with Thallium(I) acetate 0.002 mg/ml
-1.1
+0.0
-1.0
-1.2
+0.1
stress
ALP with Thallium(I) acetate 0.003 mg/ml
-1.1
-0.0
-0.7
-1.2
-0.1
alp richb
ALP
-1.1
+0.1
-0.9
-1.2
+0.1
stress
ALP with Cobalt chloride 0.2 mM
-0.9
+0.1
-1.2
-1.2
+0.4
stress
ALP with Nickel (II) chloride 3.5 mM
-0.8
+0.3
-1.0
-1.0
-0.4
stress
ALP with nitrite 0.3 mM
-1.1
+0.1
-0.1
-1.2
-0.6
stress
ALP with Thallium(I) acetate 0.004 mg/ml
-1.2
+0.1
-0.5
-1.4
+0.4
stress
ALP with nitrate 50 mM
-1.1
+0.1
-0.9
-0.9
+0.3
stress
ALP with perchlorate 6 mM
-1.3
-0.1
-0.9
-0.3
+0.0
stress
ALP with Cobalt chloride 0.25 mM
-0.8
+0.3
-1.2
-0.9
+0.2
stress
ALP with perchlorate 12 mM
-1.2
+0.2
-1.0
-0.3
-0.0
stress
ALP with Cisplatin 0.0009 mg/ml
-0.9
-0.1
-0.6
-0.9
+0.4
stress
ALP with Bacitracin 0.2 mg/ml
-1.2
+0.1
-0.8
-0.2
+0.1
stress
ALP with Zinc 2 mM
-0.9
+0.1
-0.8
-0.9
+0.5
stress
ALP with sodium fluoride 40 mM
-1.0
+0.2
-0.6
-0.8
+0.2
stress
ALP with Fusidic 0.01 mg/ml
-1.0
-0.1
-1.0
-0.0
+0.2
stress
ALP with Chloride 75 mM
-1.1
+0.2
-1.0
+0.1
-0.1
stress
ALP with Dimethyl Sulfoxide 2 vol%
-1.0
+0.4
-0.8
-0.1
-0.2
stress
ALP with Nickel (II) chloride 1.5 mM
-0.7
+0.2
-0.7
-0.7
+0.3
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.7
-0.6
+0.1
-0.6
+0.5
carbon source
L-Lactate (C)
-0.8
-0.0
-0.9
+0.6
+0.2
carbon source
propionate (C)
-0.6
+0.1
-1.1
+0.5
+0.5
carbon source
propionate (C)
-0.8
+0.1
-0.7
+0.4
+0.7
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.5
-0.2
+0.3
-0.6
+1.1
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