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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_1114 and Dsui_1115 are separated by 92 nucleotides
Dsui_1115 and Dsui_1116 are separated by 131 nucleotides
Dsui_1116 and Dsui_1117 are separated by 78 nucleotides
Dsui_1117 and Dsui_1118 are separated by 123 nucleotides
Dsui_1114: Dsui_1114 - coenzyme F390 synthetase, at 1,161,201 to 1,162,433
_1114
Dsui_1115: Dsui_1115 - putative acyl-CoA transferase/carnitine dehydratase, at 1,162,526 to 1,163,692
_1115
Dsui_1116: Dsui_1116 - methyl-accepting chemotaxis protein, at 1,163,824 to 1,165,431
_1116
Dsui_1117: Dsui_1117 - hemerythrin-like metal-binding domain-containing protein, at 1,165,510 to 1,165,926
_1117
Dsui_1118: Dsui_1118 - putative permease, at 1,166,050 to 1,166,946
_1118
Group
Condition
Dsui
_1114
Dsui
_1115
Dsui
_1116
Dsui
_1117
Dsui
_1118
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.5
-0.8
-0.7
-0.9
-0.8
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.2
-0.6
-0.6
-0.4
-0.6
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-0.1
-0.7
-0.4
-0.3
-0.9
stress
rich media with sodium chlorite 0.16 mM
-0.2
-0.3
-0.5
-0.6
-0.6
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
+0.0
-0.2
-0.6
-0.9
-0.5
carbon source
defined media with 30 mM sodium lactate
+0.1
-0.4
-0.5
-0.6
-0.7
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
+0.1
-0.6
-0.6
-0.1
-0.7
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.0
-0.7
-0.5
-0.1
-0.5
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-0.0
-0.3
-0.4
-0.4
-0.7
stress
ALP with Fusidic 0.02 mg/ml
-0.9
-0.4
-0.1
-0.2
-0.0
stress
ALP with Fusidic 0.01 mg/ml
-0.8
-0.5
-0.1
-0.3
+0.1
alp rich
rich media
-0.1
-0.1
-0.3
-0.4
-0.5
anaerobic
Anaero. lactate (C), nitrate electron acceptor
+0.1
-0.1
-0.3
-0.4
-0.6
carbon source
D,L-Lactate (C)
-0.7
-0.3
+0.1
-0.4
-0.0
stress
ALP with Zinc 1 mM
-0.1
-0.8
+0.1
-0.4
-0.1
stress
ALP with perchlorate 3 mM
-1.0
-0.3
+0.1
+0.0
+0.0
stress
ALP with perchlorate 12 mM
-0.9
-0.3
+0.0
+0.1
-0.1
stress
ALP with Fusidic 0.007 mg/ml
-0.8
-0.4
+0.1
-0.1
+0.0
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
+0.1
-0.3
-0.3
+0.1
-0.6
stress
ALP with Bacitracin 0.2 mg/ml
-1.0
-0.4
+0.1
+0.1
+0.1
stress
ALP with perchlorate 6 mM
-0.8
-0.3
+0.1
+0.1
-0.0
carbon source
pyruvate (C)
-0.6
-0.2
+0.1
+0.4
+0.3
stress
ALP with copper (II) chloride 0.6 mM
+1.3
-0.0
-0.1
-0.5
-0.6
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.4
-0.1
+0.0
+0.8
-0.2
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.2
-0.1
-0.1
+1.1
-0.4
stress
ALP with Cisplatin 0.0007 mg/ml
+0.4
-0.4
+0.3
+0.1
+0.2
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-0.0
-0.1
+0.1
+1.0
+0.1
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
-0.3
+0.5
+0.2
+0.7
+0.1
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
-0.3
+0.5
+0.2
+1.0
+0.2
stress
ALP with Nickel (II) chloride 2.5 mM
+0.9
+0.1
+0.4
+0.5
+0.3
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