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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_1099 and Dsui_1100 are separated by 9 nucleotides
Dsui_1100 and Dsui_1101 are separated by 3 nucleotides
Dsui_1101 and Dsui_1102 are separated by 81 nucleotides
Dsui_1102 and Dsui_1103 overlap by 10 nucleotides
Dsui_1099: Dsui_1099 - UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase, at 1,142,307 to 1,143,665
_1099
Dsui_1100: Dsui_1100 - hypothetical protein, at 1,143,675 to 1,143,983
_1100
Dsui_1101: Dsui_1101 - glucosamine--fructose-6-phosphate aminotransferase, isomerizing, at 1,143,987 to 1,145,813
_1101
Dsui_1102: Dsui_1102 - hypothetical protein, at 1,145,895 to 1,146,902
_1102
Dsui_1103: Dsui_1103 - DNA-binding domain-containing protein, AraC-type, at 1,146,893 to 1,147,978
_1103
Group
Condition
Dsui
_1099
Dsui
_1100
Dsui
_1101
Dsui
_1102
Dsui
_1103
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
N.D.
N.D.
-0.3
-0.6
carbon source
defined media with 30 mM sodium lactate
N.D.
N.D.
N.D.
-0.4
-0.4
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
N.D.
N.D.
-0.2
-0.5
stress
ALP with copper (II) chloride 0.6 mM
N.D.
N.D.
N.D.
-0.4
-0.1
stress
rich media with sodium chlorite 0.16 mM
N.D.
N.D.
N.D.
-0.2
-0.2
alp rich
rich media
N.D.
N.D.
N.D.
-0.2
-0.2
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
N.D.
N.D.
-0.3
-0.1
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
N.D.
N.D.
-0.1
-0.2
carbon source
R2A with sodium pyruvate
N.D.
N.D.
N.D.
+0.1
-0.4
carbon source
propionate (C)
N.D.
N.D.
N.D.
-0.3
+0.0
stress
ALP with Zinc 2 mM
N.D.
N.D.
N.D.
-0.4
+0.1
stress
ALP with Cisplatin 0.0009 mg/ml
N.D.
N.D.
N.D.
-0.3
+0.1
carbon source
D,L-Lactate (C)
N.D.
N.D.
N.D.
-0.3
+0.1
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
N.D.
N.D.
-0.1
+0.2
stress
ALP with Chloride 75 mM
N.D.
N.D.
N.D.
-0.1
+0.3
stress
ALP with Nickel (II) chloride 3.5 mM
N.D.
N.D.
N.D.
-0.0
+0.3
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
-0.0
+0.3
carbon source
R2A with sodium pyruvate
N.D.
N.D.
N.D.
-0.0
+0.3
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
N.D.
N.D.
N.D.
+0.2
+0.1
stress
ALP with sodium fluoride 40 mM
N.D.
N.D.
N.D.
+0.1
+0.2
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
+0.1
+0.2
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
+0.2
+0.2
stress
ALP with Cobalt chloride 0.25 mM
N.D.
N.D.
N.D.
+0.0
+0.3
stress
ALP with Thallium(I) acetate 0.003 mg/ml
N.D.
N.D.
N.D.
+0.1
+0.3
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
N.D.
N.D.
N.D.
+0.2
+0.3
stress
rich media with sodium chlorite 0.16 mM
N.D.
N.D.
N.D.
+0.2
+0.3
stress
ALP with Thallium(I) acetate 0.002 mg/ml
N.D.
N.D.
N.D.
+0.2
+0.3
stress
ALP with Cisplatin 0.0007 mg/ml
N.D.
N.D.
N.D.
+0.1
+0.5
stress
rich media with sodium chlorite 0.16 mM
N.D.
N.D.
N.D.
+0.2
+0.3
stress
ALP with Nickel (II) chloride 2.5 mM
N.D.
N.D.
N.D.
+0.4
+0.6
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