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Fitness for 5 genes in
Dechlorosoma suillum PS
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_1049 and Dsui_1050 are separated by 38 nucleotides
Dsui_1050 and Dsui_1051 are separated by 79 nucleotides
Dsui_1051 and Dsui_1052 are separated by 60 nucleotides
Dsui_1052 and Dsui_1053 overlap by 4 nucleotides
Dsui_1049: Dsui_1049 - hypothetical protein, at 1,082,509 to 1,083,009
_1049
Dsui_1050: Dsui_1050 - signal transduction histidine kinase, nitrogen specific, at 1,083,048 to 1,084,103
_1050
Dsui_1051: Dsui_1051 - nitrogen regulation protein NR(I), at 1,084,183 to 1,085,619
_1051
Dsui_1052: Dsui_1052 - birA, biotin-(acetyl-CoA-carboxylase) ligase, at 1,085,680 to 1,086,555
_1052
Dsui_1053: Dsui_1053 - pantothenate kinase, type III, at 1,086,552 to 1,087,310
_1053
Group
Condition
Dsui
_1049
Dsui
_1050
Dsui
_1051
Dsui
_1052
Dsui
_1053
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
-0.2
-1.5
-3.4
N.D.
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-1.1
-0.4
-0.1
N.D.
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-1.0
-0.4
-0.1
N.D.
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-1.2
-0.2
-0.0
N.D.
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-1.1
-0.1
+0.0
N.D.
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.8
-0.2
-0.1
N.D.
N.D.
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
-1.0
-0.1
+0.2
N.D.
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-0.8
+0.2
-0.1
N.D.
N.D.
anaerobic
anaerobic ALP with 3 all (C)s and 5mM perchlorate
-0.5
+0.2
-0.3
N.D.
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-0.9
+0.2
+0.1
N.D.
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-0.9
+0.3
-0.0
N.D.
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-1.0
+0.4
+0.2
N.D.
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.9
+0.0
+0.4
N.D.
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.9
+0.1
+0.4
N.D.
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.8
+0.1
+0.4
N.D.
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.8
+0.0
+0.5
N.D.
N.D.
carbon source
a-Ketoglutaric (C)
+0.4
+0.0
-0.6
N.D.
N.D.
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-0.6
+0.2
+0.5
N.D.
N.D.
carbon source
propionate (C)
+0.4
+0.1
-0.5
N.D.
N.D.
stress
ALP with Cisplatin 0.0009 mg/ml
+0.3
+0.3
-0.5
N.D.
N.D.
stress
ALP with Fusidic 0.01 mg/ml
+0.1
+0.4
-0.4
N.D.
N.D.
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-0.4
+0.1
+0.5
N.D.
N.D.
carbon source
L-Lactate (C)
+0.3
+0.4
+0.3
N.D.
N.D.
stress
ALP with nitrite 0.15 mM
+0.3
+0.5
+0.3
N.D.
N.D.
stress
ALP with nitrite 0.3 mM
+0.5
+0.5
+0.2
N.D.
N.D.
stress
ALP with Nickel (II) chloride 3.5 mM
-0.0
+0.7
+0.5
N.D.
N.D.
stress
ALP with Cobalt chloride 0.2 mM
+0.1
+1.0
+0.7
N.D.
N.D.
stress
ALP with Nickel (II) chloride 2.5 mM
-0.1
+1.6
+1.2
N.D.
N.D.
stress
ALP with copper (II) chloride 0.6 mM
+0.1
+1.2
+1.5
N.D.
N.D.
stress
ALP with Cobalt chloride 0.25 mM
+0.0
+1.8
+1.2
N.D.
N.D.
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