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Fitness for 5 genes in
Dechlorosoma suillum PS
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_1038 and Dsui_1039 are separated by 13 nucleotides
Dsui_1039 and Dsui_1040 are separated by 82 nucleotides
Dsui_1040 and Dsui_1041 are separated by 25 nucleotides
Dsui_1041 and Dsui_1042 are separated by 5 nucleotides
Dsui_1038: Dsui_1038 - peptidyl-tRNA hydrolase, at 1,069,855 to 1,070,433
_1038
Dsui_1039: Dsui_1039 - GTP-binding protein YchF, at 1,070,447 to 1,071,538
_1039
Dsui_1040: Dsui_1040 - glutamyl-queuosine tRNA(Asp) synthetase, at 1,071,621 to 1,072,532
_1040
Dsui_1041: Dsui_1041 - phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase, at 1,072,558 to 1,073,718
_1041
Dsui_1042: Dsui_1042 - metal-dependent hydrolase, at 1,073,724 to 1,074,479
_1042
Group
Condition
Dsui
_1038
Dsui
_1039
Dsui
_1040
Dsui
_1041
Dsui
_1042
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
N.D.
-0.5
-0.9
-1.2
stress
ALP with Bacitracin 0.2 mg/ml
N.D.
N.D.
+0.0
-1.9
-0.3
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
N.D.
-0.5
-0.9
-0.6
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
N.D.
-0.6
-0.9
-0.4
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
N.D.
-0.3
-1.2
-0.3
stress
ALP with Chloride 75 mM
N.D.
N.D.
+0.4
-2.0
+0.0
stress
rich media with sodium chlorite 0.16 mM
N.D.
N.D.
-0.2
-0.3
-0.9
alp richb
ALP
N.D.
N.D.
+0.1
-1.0
-0.5
stress
ALP with Cisplatin 0.0009 mg/ml
N.D.
N.D.
-0.5
-0.5
-0.3
stress
ALP with Dimethyl Sulfoxide 2 vol%
N.D.
N.D.
-0.2
-1.1
-0.1
stress
ALP with Cobalt chloride 0.2 mM
N.D.
N.D.
+0.2
-1.4
-0.2
anaerobic
Anaero. lactate (C), nitrate electron acceptor
N.D.
N.D.
-0.0
-0.9
-0.4
stress
ALP with nitrate 50 mM
N.D.
N.D.
-0.0
-1.1
-0.2
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
-0.2
-1.0
-0.1
stress
ALP with copper (II) chloride 0.6 mM
N.D.
N.D.
+0.3
-0.5
-0.9
carbon source
D-Lactate (C)
N.D.
N.D.
+0.3
-1.4
+0.1
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
N.D.
N.D.
+0.3
-1.0
-0.3
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
N.D.
N.D.
+0.3
-1.2
+0.0
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
+0.2
-0.8
-0.3
stress
ALP with Cisplatin 0.0007 mg/ml
N.D.
N.D.
-0.3
-0.7
+0.2
carbon source
D,L-Lactate (C)
N.D.
N.D.
+0.4
-1.3
+0.1
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
+0.3
-0.6
-0.3
carbon source
propionate (C)
N.D.
N.D.
+0.3
-0.9
+0.1
carbon source
L-Lactate (C)
N.D.
N.D.
+0.2
-0.9
+0.2
stress
ALP with perchlorate 6 mM
N.D.
N.D.
+0.3
-0.8
+0.1
stress
ALP with Fusidic 0.02 mg/ml
N.D.
N.D.
+0.9
-1.1
+0.3
stress
ALP with Fusidic 0.01 mg/ml
N.D.
N.D.
+1.2
-0.9
+0.1
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
N.D.
N.D.
+0.3
+0.3
+0.9
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
N.D.
N.D.
-0.0
+0.3
+1.4
stress
ALP with Nickel (II) chloride 2.5 mM
N.D.
N.D.
-0.1
+1.5
+0.7
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