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Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_1025 and Dsui_1026 are separated by 14 nucleotides
Dsui_1026 and Dsui_1027 overlap by 1 nucleotides
Dsui_1027 and Dsui_1028 overlap by 11 nucleotides
Dsui_1028 and Dsui_1029 are separated by 16 nucleotides
Dsui_1025: Dsui_1025 - putative Zn-dependent peptidase, at 1,057,498 to 1,058,865
_1025
Dsui_1026: Dsui_1026 - putative Zn-dependent peptidase, at 1,058,880 to 1,060,172
_1026
Dsui_1027: Dsui_1027 - RNA methyltransferase, RsmD family, at 1,060,172 to 1,060,780
_1027
Dsui_1028: Dsui_1028 - pantetheine-phosphate adenylyltransferase, at 1,060,770 to 1,061,267
_1028
Dsui_1029: Dsui_1029 - hypothetical protein, at 1,061,284 to 1,061,541
_1029
Group
Condition
Dsui
_1025
Dsui
_1026
Dsui
_1027
Dsui
_1028
Dsui
_1029
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
-2.8
-2.9
-1.4
N.D.
N.D.
stress
ALP with Fusidic 0.02 mg/ml
-3.3
-2.9
-0.6
N.D.
N.D.
stress
ALP with Fusidic 0.007 mg/ml
-2.9
-2.9
-0.7
N.D.
N.D.
stress
ALP with Fusidic 0.01 mg/ml
-2.5
-3.5
-0.5
N.D.
N.D.
anaerobic
anaerobic ALP with 3 all (C)s and 5mM perchlorate
-1.8
-2.2
-1.4
N.D.
N.D.
stress
ALP with Nickel (II) chloride 2.5 mM
-1.8
-3.1
-0.5
N.D.
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-2.1
-1.5
-0.7
N.D.
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-1.7
-1.4
-0.6
N.D.
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-1.5
-1.7
-0.6
N.D.
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-1.0
-1.8
-0.8
N.D.
N.D.
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-1.7
-2.0
+0.2
N.D.
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-1.0
-1.4
-1.0
N.D.
N.D.
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-1.5
-2.1
+0.2
N.D.
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-1.6
-1.0
-0.5
N.D.
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-1.2
-2.0
+0.2
N.D.
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.9
-1.5
-0.4
N.D.
N.D.
stress
ALP with copper (II) chloride 0.6 mM
-1.6
-1.4
+0.2
N.D.
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-1.3
-0.9
-0.4
N.D.
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.8
-1.5
-0.2
N.D.
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-1.0
-1.4
-0.1
N.D.
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-1.0
-1.3
-0.2
N.D.
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-1.3
-1.2
+0.0
N.D.
N.D.
stress
ALP with Zinc 2 mM
-0.9
-1.3
-0.0
N.D.
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-1.2
-1.1
+0.0
N.D.
N.D.
stress
ALP with Cobalt chloride 0.2 mM
-0.9
-1.2
+0.0
N.D.
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.7
-1.2
-0.1
N.D.
N.D.
stress
ALP with Thallium(I) acetate 0.004 mg/ml
-0.9
-1.2
+0.2
N.D.
N.D.
carbon source
propionate (C)
-0.5
-1.3
+0.3
N.D.
N.D.
stress
ALP with Zinc 1 mM
-0.6
-1.0
+0.3
N.D.
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.6
-1.0
+0.6
N.D.
N.D.
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