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Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_1019 and Dsui_1021 are separated by 796 nucleotides
Dsui_1021 and Dsui_1022 are separated by 208 nucleotides
Dsui_1022 and Dsui_1023 overlap by 4 nucleotides
Dsui_1023 and Dsui_1024 are separated by 13 nucleotides
Dsui_1019: Dsui_1019 - transposase, at 1,051,587 to 1,052,387
_1019
Dsui_1021: Dsui_1021 - NAD(FAD)-dependent dehydrogenase, at 1,053,184 to 1,054,518
_1021
Dsui_1022: Dsui_1022 - cell division protein, at 1,054,727 to 1,055,632
_1022
Dsui_1023: Dsui_1023 - putative ATPase involved in cell division, at 1,055,629 to 1,056,309
_1023
Dsui_1024: Dsui_1024 - signal recognition particle-docking protein FtsY, at 1,056,323 to 1,057,327
_1024
Group
Condition
Dsui
_1019
Dsui
_1021
Dsui
_1022
Dsui
_1023
Dsui
_1024
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
-0.1
-1.6
-1.2
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
+0.0
-1.7
-1.2
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
-0.1
-1.7
-1.1
N.D.
stress
ALP with copper (II) chloride 0.6 mM
N.D.
-0.6
-1.3
-0.8
N.D.
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
N.D.
+0.2
-1.2
-1.6
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
-0.1
-1.3
-1.1
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
+0.0
-1.4
-1.0
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
+0.1
-0.9
-1.4
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
-0.2
-1.1
-0.9
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
+0.1
-1.2
-1.0
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
-0.0
-1.2
-1.0
N.D.
stress
ALP with nitrate 75 mM
N.D.
+0.2
-1.2
-1.1
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
+0.1
-1.2
-1.0
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
+0.1
-0.9
-1.1
N.D.
anaerobic
anaerobic ALP with 3 all (C)s and 5mM perchlorate
N.D.
+0.0
-0.8
-1.2
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
+0.2
-1.0
-1.0
N.D.
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
N.D.
+0.2
-0.9
-1.1
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
+0.0
-0.8
-0.8
N.D.
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
N.D.
+0.3
-0.9
-1.0
N.D.
stress
ALP with Cisplatin 0.0009 mg/ml
N.D.
+0.1
-0.7
-1.0
N.D.
stress
ALP with Cisplatin 0.0007 mg/ml
N.D.
+0.2
-0.8
-0.9
N.D.
stress
ALP with Cisplatin 0.0008 mg/ml
N.D.
+0.2
-0.9
-0.8
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
+0.1
-0.8
-0.8
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
+0.2
-0.5
-1.1
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
+0.1
-0.3
-1.2
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
+0.2
-0.6
-0.9
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
+0.2
-0.4
-0.9
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
+0.2
-0.5
-0.8
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
+0.2
-0.4
-0.8
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
+0.3
-0.4
-0.8
N.D.
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