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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_1007 and Dsui_1008 are separated by 63 nucleotides
Dsui_1008 and Dsui_1009 are separated by 121 nucleotides
Dsui_1009 and Dsui_1010 are separated by 141 nucleotides
Dsui_1010 and Dsui_1011 are separated by 6 nucleotides
Dsui_1007: Dsui_1007 - arabinose efflux permease family protein, at 1,034,396 to 1,035,610
_1007
Dsui_1008: Dsui_1008 - Uncharacterized protein conserved in bacteria (DUF2242), at 1,035,674 to 1,036,201
_1008
Dsui_1009: Dsui_1009 - PAS domain S-box, at 1,036,323 to 1,040,168
_1009
Dsui_1010: Dsui_1010 - ABC-type branched-chain amino acid transport system, periplasmic component, at 1,040,310 to 1,041,413
_1010
Dsui_1011: Dsui_1011 - PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein, at 1,041,420 to 1,044,800
_1011
Group
Condition
Dsui
_1007
Dsui
_1008
Dsui
_1009
Dsui
_1010
Dsui
_1011
carbon source
a-Ketoglutaric (C)
-0.8
-0.1
-0.3
-1.1
+0.3
stress
ALP with copper (II) chloride 0.6 mM
-0.7
+0.3
-0.2
-0.8
-0.3
stress
ALP with Cisplatin 0.0007 mg/ml
-0.3
-0.1
-0.3
-1.0
+0.1
carbon source
L-Lactate (C)
-0.4
+0.2
-0.2
-1.5
+0.3
stress
ALP with Fusidic 0.007 mg/ml
-0.3
-0.8
-0.1
-0.6
+0.2
carbon source
pyruvate (C)
-0.7
-0.1
-0.1
-0.8
+0.2
stress
ALP with Fusidic 0.02 mg/ml
-0.4
-1.0
-0.0
+0.0
+0.1
stress
ALP with Bacitracin 0.2 mg/ml
-0.5
+0.1
-0.1
-0.8
+0.1
stress
ALP with Cisplatin 0.0008 mg/ml
-0.2
-0.2
+0.0
-1.0
+0.2
carbon source
D,L-Lactate (C)
-0.5
+0.0
-0.2
-0.8
+0.4
stress
ALP with Fusidic 0.01 mg/ml
-0.1
-1.0
-0.2
-0.0
+0.3
stress
ALP with nitrite 0.45 mM
-0.4
+0.2
-0.3
-0.7
+0.2
carbon source
D-Lactate (C)
-0.2
-0.2
-0.3
-0.5
+0.3
stress
ALP with Zinc 2 mM
-0.3
+0.1
-0.1
-0.9
+0.4
stress
ALP with nitrate 75 mM
+0.0
+0.3
-0.4
-1.0
+0.4
stress
ALP with Nickel (II) chloride 3.5 mM
-0.3
+0.2
+0.0
-0.6
+0.3
stress
ALP with perchlorate 6 mM
-0.1
+0.2
-0.3
-0.6
+0.4
stress
ALP with sodium fluoride 40 mM
+0.1
+0.1
-0.4
-0.5
+0.3
stress
ALP with nitrate 50 mM
-0.5
+0.3
-0.2
-0.1
+0.3
stress
ALP with Thallium(I) acetate 0.003 mg/ml
-0.4
+0.3
+0.1
-0.5
+0.3
carbon source
propionate (C)
-0.5
+0.2
-0.2
-0.1
+0.4
carbon source
propionate (C)
-0.6
+0.3
-0.2
+0.1
+0.4
stress
ALP with perchlorate 12 mM
-0.2
+0.4
+0.0
-0.6
+0.4
stress
ALP with Thallium(I) acetate 0.004 mg/ml
+0.2
+0.2
+0.0
-0.6
+0.4
stress
ALP with Nickel (II) chloride 2.5 mM
+0.4
+0.6
+0.1
-0.4
+0.4
alp rich
rich media
+0.3
-0.2
+0.4
+0.7
+0.1
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.0
+0.4
+0.4
+0.4
+0.3
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.2
+0.6
+0.3
+0.3
+0.1
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
+0.1
+0.5
+0.3
+0.6
+0.2
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.1
+0.6
+0.4
+0.5
+0.3
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