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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_0970 and Dsui_0971 are separated by 73 nucleotides
Dsui_0971 and Dsui_0972 are separated by 18 nucleotides
Dsui_0972 and Dsui_0973 are separated by 236 nucleotides
Dsui_0973 and Dsui_0974 are separated by 85 nucleotides
Dsui_0970: Dsui_0970 - PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein, at 995,477 to 996,766
_0970
Dsui_0971: Dsui_0971 - poly(R)-hydroxyalkanoic acid synthase, class I, at 996,840 to 998,669
_0971
Dsui_0972: Dsui_0972 - Zn-dependent hydrolase, glyoxylase, at 998,688 to 999,722
_0972
Dsui_0973: Dsui_0973 - putative transcriptional regulator, at 999,959 to 1,000,429
_0973
Dsui_0974: Dsui_0974 - hypothetical protein, at 1,000,515 to 1,000,979
_0974
Group
Condition
Dsui
_0970
Dsui
_0971
Dsui
_0972
Dsui
_0973
Dsui
_0974
stress
ALP with nitrite 0.45 mM
-0.8
-0.1
-0.4
+0.2
-2.1
stress
ALP with perchlorate 3 mM
-0.6
+0.0
-0.6
+0.0
-2.0
stress
ALP with nitrate 50 mM
-0.1
+0.2
-0.3
+0.1
-2.9
stress
ALP with Cisplatin 0.0009 mg/ml
-0.1
-0.1
+0.1
-0.2
-2.7
stress
ALP with Nickel (II) chloride 1.5 mM
-0.3
+0.1
-0.2
-0.2
-2.3
stress
ALP with Dimethyl Sulfoxide 2 vol%
-0.3
-0.1
-0.4
-0.3
-1.7
stress
ALP with Zinc 1 mM
-0.9
-0.0
-0.3
+0.2
-1.8
stress
ALP with Cisplatin 0.0008 mg/ml
-0.3
+0.0
+0.1
+0.2
-2.7
carbon source
pyruvate (C)
-0.4
-0.1
-0.1
-0.5
-1.6
carbon source
D,L-Lactate (C)
-0.7
-0.3
-0.3
-0.3
-1.0
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.2
-1.4
+0.2
-1.3
+0.1
carbon source
L-Lactate (C)
-0.4
-0.1
-0.2
-0.2
-1.6
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.1
-1.2
+0.1
-1.3
-0.3
stress
ALP with Bacitracin 0.2 mg/ml
-0.6
-0.1
-0.6
-0.2
-1.0
carbon source
D,L-Lactate (C)
-0.4
+0.0
-0.3
-0.1
-1.6
stress
ALP with copper (II) chloride 0.6 mM
-0.2
-0.6
-0.5
+0.7
-1.6
stress
ALP with Thallium(I) acetate 0.002 mg/ml
-0.4
+0.1
+0.0
+0.3
-2.1
stress
ALP with Cobalt chloride 0.2 mM
-0.3
+0.3
-0.1
-0.3
-1.6
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.2
-1.7
+0.1
-0.9
+0.3
stress
ALP with nitrite 0.15 mM
-0.7
+0.1
-0.1
+0.3
-1.4
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.1
-1.2
+0.1
-0.8
+0.2
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
+0.2
-1.2
+0.3
-1.0
+0.2
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.2
-1.1
+0.1
-0.9
+0.2
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.1
-1.2
+0.3
-0.9
+0.2
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
+0.3
-1.2
+0.4
-0.9
+0.2
stress
ALP with Thallium(I) acetate 0.003 mg/ml
-0.5
+0.3
+0.3
+0.3
-1.4
stress
ALP with Cisplatin 0.0007 mg/ml
-0.1
+0.2
+0.4
+0.2
-1.7
stress
ALP with Fusidic 0.01 mg/ml
+0.3
+0.0
+0.3
+0.2
-1.8
stress
ALP with Nickel (II) chloride 2.5 mM
+0.2
+1.0
+0.0
+0.4
-1.9
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
-0.3
-0.6
+0.2
+0.2
+1.2
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