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Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_0962 and Dsui_0963 are separated by 17 nucleotides
Dsui_0963 and Dsui_0964 are separated by 1 nucleotides
Dsui_0964 and Dsui_0965 are separated by 88 nucleotides
Dsui_0965 and Dsui_0966 are separated by 219 nucleotides
Dsui_0962: Dsui_0962 - collagenase-like protease, at 987,556 to 988,569
_0962
Dsui_0963: Dsui_0963 - collagenase-like protease, at 988,587 to 989,498
_0963
Dsui_0964: Dsui_0964 - putative lipid carrier protein, at 989,500 to 989,997
_0964
Dsui_0965: Dsui_0965 - putative membrane protein, at 990,086 to 990,778
_0965
Dsui_0966: Dsui_0966 - methyl-accepting chemotaxis protein, at 990,998 to 993,025
_0966
Group
Condition
Dsui
_0962
Dsui
_0963
Dsui
_0964
Dsui
_0965
Dsui
_0966
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-4.8
-5.0
-8.3
-0.3
-0.5
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-7.3
-5.6
-5.1
+0.1
+0.0
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-7.0
-5.2
-5.0
-0.2
-0.1
No stressor control+ 10 mM ClO4 and 20 mM lactate
-7.1
-5.2
-5.3
+0.0
-0.0
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-4.9
-3.6
-7.9
-0.1
-0.5
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-6.6
-4.7
-3.6
+0.1
-0.1
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-5.3
-4.2
-5.1
-0.1
-0.2
No stressor control+ 10 mM ClO4 and 20 mM lactate
-5.4
-4.8
-4.3
+0.0
+0.0
No stressor control+ 10 mM ClO4 and 20 mM lactate
-5.0
-4.4
-3.8
+0.2
+0.0
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-4.6
-4.0
-4.2
+0.1
+0.0
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-4.8
-3.9
-3.7
+0.1
-0.2
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-2.7
-3.3
-3.0
-0.1
-0.2
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-2.6
-2.6
-3.9
-0.1
+0.2
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-2.6
-2.5
-3.8
-0.0
+0.1
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
-2.3
-3.1
-1.9
-0.0
-0.2
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
-2.2
-2.8
-2.4
-0.0
-0.0
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-2.5
-2.4
-2.0
-0.3
-0.2
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-2.2
-2.1
-2.3
-0.1
-0.2
anaerobic
anaerobic ALP with 3 all (C)s and 5mM perchlorate
-3.0
-2.4
-1.4
-0.2
+0.2
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
-3.4
-1.6
-1.6
-0.1
+0.0
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-2.1
-3.0
-1.7
-0.0
+0.2
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-2.1
-2.3
-1.9
+0.0
-0.1
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-2.2
-2.4
-2.0
+0.1
+0.3
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-2.1
-2.0
-2.2
-0.1
+0.3
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-2.0
-2.0
-2.1
+0.0
+0.3
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-1.7
-1.9
-2.3
-0.0
+0.3
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-1.6
-1.7
-2.4
+0.1
+0.2
stress
ALP with Cisplatin 0.0009 mg/ml
+0.1
-0.8
+0.1
-0.3
-2.8
stress
ALP with nitrite 0.3 mM
+0.2
-0.3
-0.8
+0.0
-2.7
stress
ALP with Fusidic 0.02 mg/ml
+0.2
+0.1
-0.1
+0.4
-2.9
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