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Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_0958 and Dsui_0959 are separated by 212 nucleotides
Dsui_0959 and Dsui_0960 are separated by 9 nucleotides
Dsui_0960 and Dsui_0961 are separated by 96 nucleotides
Dsui_0961 and Dsui_0962 are separated by 140 nucleotides
Dsui_0958: Dsui_0958 - ferredoxin, at 984,891 to 985,238
_0958
Dsui_0959: Dsui_0959 - hypothetical protein, at 985,451 to 985,690
_0959
Dsui_0960: Dsui_0960 - putative permease, at 985,700 to 986,755
_0960
Dsui_0961: Dsui_0961 - RNA polymerase sigma factor, SigZ family, at 986,852 to 987,415
_0961
Dsui_0962: Dsui_0962 - collagenase-like protease, at 987,556 to 988,569
_0962
Group
Condition
Dsui
_0958
Dsui
_0959
Dsui
_0960
Dsui
_0961
Dsui
_0962
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
+0.3
N.D.
-0.2
-1.2
-7.0
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.1
N.D.
-0.1
-0.6
-7.1
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.0
N.D.
+0.0
-0.4
-7.3
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
+0.1
N.D.
-0.2
-0.6
-6.6
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.1
N.D.
-0.3
-0.9
-4.9
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.2
N.D.
-0.2
-0.8
-4.8
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.1
N.D.
-0.2
-0.5
-5.3
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.1
N.D.
-0.5
-0.3
-4.8
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.2
N.D.
-0.0
-0.5
-5.4
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.0
N.D.
-0.0
-0.5
-5.0
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.2
N.D.
-0.2
-0.5
-4.6
alp richb
ALP
-2.7
N.D.
-1.3
-1.2
+0.2
stress
ALP with Zinc 2 mM
-2.4
N.D.
-1.0
-1.2
-0.1
stress
ALP with Zinc 1 mM
-2.6
N.D.
-1.2
-0.7
-0.0
stress
ALP with nitrate 50 mM
-2.7
N.D.
-1.3
-0.8
+0.2
stress
ALP with Thallium(I) acetate 0.002 mg/ml
-2.7
N.D.
-1.2
-0.6
+0.0
stress
ALP with sodium fluoride 40 mM
-2.5
N.D.
-1.1
-1.0
+0.1
stress
ALP with Cobalt chloride 0.2 mM
-2.4
N.D.
-1.1
-1.0
+0.1
stress
ALP with Cisplatin 0.0009 mg/ml
-2.5
N.D.
-1.0
-1.0
+0.1
stress
ALP with nitrite 0.15 mM
-2.1
N.D.
-1.2
-0.9
-0.1
stress
ALP with Thallium(I) acetate 0.003 mg/ml
-1.8
N.D.
-1.2
-1.1
-0.1
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.1
N.D.
-0.6
-0.8
-2.7
stress
ALP with nitrite 0.45 mM
-2.6
N.D.
-1.2
-0.2
+0.0
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.0
N.D.
-0.5
-0.7
-2.6
stress
ALP with sodium fluoride 30 mM
-2.4
N.D.
-1.0
-0.7
+0.3
stress
ALP with nitrite 0.3 mM
-2.6
N.D.
-1.2
-0.3
+0.2
stress
ALP with Cisplatin 0.0007 mg/ml
-2.2
N.D.
-0.7
-0.9
+0.0
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
+0.5
N.D.
-0.6
-0.5
-2.5
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
+0.7
N.D.
+0.3
-0.0
-3.4
anaerobic
anaerobic ALP with 3 all (C)s and 5mM perchlorate
+0.9
N.D.
+0.2
-0.1
-3.0
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