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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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2
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_0901 and Dsui_0902 are separated by 20 nucleotides
Dsui_0902 and Dsui_0903 overlap by 4 nucleotides
Dsui_0903 and Dsui_0904 are separated by 392 nucleotides
Dsui_0904 and Dsui_0905 are separated by 309 nucleotides
Dsui_0901: Dsui_0901 - hypothetical protein, at 919,414 to 919,713
_0901
Dsui_0902: Dsui_0902 - lipoate-protein ligase B, at 919,734 to 920,354
_0902
Dsui_0903: Dsui_0903 - lipoate synthase, at 920,351 to 921,298
_0903
Dsui_0904: Dsui_0904 - hypothetical protein, at 921,691 to 922,512
_0904
Dsui_0905: Dsui_0905 - hypothetical protein, at 922,822 to 923,034
_0905
Group
Condition
Dsui
_0901
Dsui
_0902
Dsui
_0903
Dsui
_0904
Dsui
_0905
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-1.1
N.D.
N.D.
-0.3
-1.4
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
-0.8
N.D.
N.D.
-0.1
-1.7
anaerobic
anaerobic ALP with 3 all (C)s and 5mM perchlorate
+0.2
N.D.
N.D.
+0.0
-2.7
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
-0.6
N.D.
N.D.
-0.1
-1.6
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.4
N.D.
N.D.
-0.3
-1.3
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.3
N.D.
N.D.
-0.4
-1.4
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.0
N.D.
N.D.
-0.3
-1.3
carbon source
D,L-Lactate (C)
-1.3
N.D.
N.D.
-0.2
-0.0
carbon source
pyruvate (C)
-1.1
N.D.
N.D.
-0.3
-0.2
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.1
N.D.
N.D.
-0.1
-1.3
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-1.2
N.D.
N.D.
-0.1
-0.2
carbon source
R2A with sodium pyruvate
-1.3
N.D.
N.D.
-0.1
-0.1
carbon source
propionate (C)
-1.2
N.D.
N.D.
-0.3
+0.0
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.1
N.D.
N.D.
-0.3
-1.0
carbon source
D,L-Lactate (C)
-1.2
N.D.
N.D.
-0.2
-0.1
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-1.0
N.D.
N.D.
-0.1
-0.2
stress
rich media with hydrogen peroxide 5 mM
-1.0
N.D.
N.D.
-0.1
-0.2
stress
ALP with nitrite 0.3 mM
-0.9
N.D.
N.D.
-0.3
-0.1
alp rich
rich media
-0.9
N.D.
N.D.
-0.2
-0.3
carbon source
defined media with 30 mM sodium lactate
-1.2
N.D.
N.D.
+0.0
-0.1
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-0.1
N.D.
N.D.
-0.2
-0.9
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-1.0
N.D.
N.D.
-0.1
-0.2
carbon source
D-Lactate (C)
-0.9
N.D.
N.D.
-0.2
+0.0
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
+1.3
N.D.
N.D.
+0.0
-2.5
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.8
N.D.
N.D.
+0.2
-0.4
stress
ALP with Chloride 75 mM
+0.4
N.D.
N.D.
-0.2
-0.8
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.9
N.D.
N.D.
+0.0
-0.8
stress
ALP with Fusidic 0.02 mg/ml
+1.9
N.D.
N.D.
-0.2
-0.2
stress
ALP with Fusidic 0.01 mg/ml
+1.7
N.D.
N.D.
-0.1
+0.0
stress
ALP with Fusidic 0.007 mg/ml
+1.9
N.D.
N.D.
-0.1
-0.1
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