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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_0842 and Dsui_0843 overlap by 4 nucleotides
Dsui_0843 and Dsui_0844 are separated by 79 nucleotides
Dsui_0844 and Dsui_0845 are separated by 123 nucleotides
Dsui_0845 and Dsui_0846 are separated by 273 nucleotides
Dsui_0842: Dsui_0842 - ABC-type branched-chain amino acid transport systems, ATPase component, at 857,112 to 858,893
_0842
Dsui_0843: Dsui_0843 - branched-chain amino acid ABC-type transport system, permease component, at 858,890 to 859,939
_0843
Dsui_0844: Dsui_0844 - ABC-type branched-chain amino acid transport system, periplasmic component, at 860,019 to 861,173
_0844
Dsui_0845: Dsui_0845 - response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 861,297 to 862,994
_0845
Dsui_0846: Dsui_0846 - glucose-inhibited division protein A, at 863,268 to 865,142
_0846
Group
Condition
Dsui
_0842
Dsui
_0843
Dsui
_0844
Dsui
_0845
Dsui
_0846
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
+0.3
+0.1
+0.4
-0.2
-5.8
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
+0.1
-0.1
+0.3
-0.1
-5.1
stress
ALP with copper (II) chloride 0.6 mM
-0.6
-0.8
-0.5
-0.6
-2.1
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.1
-0.2
+0.2
-0.3
-4.2
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.0
-0.1
+0.2
-0.1
-3.5
stress
ALP with Nickel (II) chloride 1.5 mM
-0.3
-0.2
-0.2
-0.7
-1.9
stress
ALP with Cobalt chloride 0.25 mM
+0.1
-0.1
+0.1
-1.0
-2.3
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.2
+0.1
+0.3
-0.1
-3.5
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.2
+0.1
+0.3
-0.1
-3.5
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.2
+0.1
+0.3
-0.1
-3.6
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.2
+0.0
+0.3
-0.1
-3.4
stress
ALP with Nickel (II) chloride 3.5 mM
-0.1
-0.0
+0.0
-0.5
-2.3
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.2
+0.1
+0.3
-0.0
-3.3
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.1
+0.0
+0.3
-0.1
-3.2
alp richb
ALP
+0.3
+0.1
+0.2
-0.6
-2.5
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
+0.2
+0.1
+0.2
-0.1
-2.9
stress
ALP with Zinc 2 mM
+0.2
+0.1
+0.2
-1.0
-2.0
stress
ALP with Zinc 1 mM
+0.3
+0.1
+0.2
-0.8
-2.2
stress
ALP with nitrite 0.45 mM
+0.1
-0.0
+0.2
-0.5
-2.0
carbon source
D,L-Lactate (C)
+0.2
+0.1
+0.1
-0.4
-2.0
stress
ALP with nitrite 0.3 mM
+0.1
+0.1
+0.2
-0.4
-1.9
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
+0.2
-0.0
+0.3
-0.2
-2.1
stress
ALP with Cobalt chloride 0.2 mM
+0.2
+0.0
+0.1
-0.6
-1.4
stress
ALP with Bacitracin 0.2 mg/ml
+0.3
+0.1
+0.3
-0.5
-1.8
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.2
+0.0
+0.3
-0.1
-2.0
stress
ALP with Nickel (II) chloride 2.5 mM
+0.4
+0.3
+0.2
-0.2
-2.1
stress
ALP with nitrate 50 mM
+0.2
+0.1
+0.3
-0.6
-1.4
stress
ALP with Fusidic 0.02 mg/ml
-0.8
-0.7
-0.9
-0.2
+1.4
stress
ALP with Fusidic 0.007 mg/ml
-0.8
-0.9
-0.8
-0.0
+2.5
stress
ALP with Fusidic 0.01 mg/ml
-0.7
-0.8
-1.1
-0.3
+2.9
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