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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_0814 and Dsui_0815 are separated by 90 nucleotides
Dsui_0815 and Dsui_0816 are separated by 57 nucleotides
Dsui_0816 and Dsui_0817 are separated by 55 nucleotides
Dsui_0817 and Dsui_0818 are separated by 117 nucleotides
Dsui_0814: Dsui_0814 - S1/P1 Nuclease, at 825,764 to 826,687
_0814
Dsui_0815: Dsui_0815 - Zn-dependent protease with chaperone function, at 826,778 to 827,623
_0815
Dsui_0816: Dsui_0816 - methionyl-tRNA formyltransferase, at 827,681 to 828,607
_0816
Dsui_0817: Dsui_0817 - peptide deformylase, at 828,663 to 829,166
_0817
Dsui_0818: Dsui_0818 - LysM domain-containing protein, at 829,284 to 830,339
_0818
Group
Condition
Dsui
_0814
Dsui
_0815
Dsui
_0816
Dsui
_0817
Dsui
_0818
stress
ALP with copper (II) chloride 0.6 mM
-0.2
-1.4
N.D.
N.D.
+0.2
stress
ALP with Nickel (II) chloride 1.5 mM
+0.1
-0.5
N.D.
N.D.
+0.0
carbon source
D-Lactate (C)
+0.2
-0.3
N.D.
N.D.
+0.1
stress
ALP with Zinc 1 mM
+0.2
-0.3
N.D.
N.D.
+0.2
carbon source
propionate (C)
+0.1
-0.3
N.D.
N.D.
+0.2
stress
ALP with Zinc 2 mM
+0.1
-0.3
N.D.
N.D.
+0.3
stress
ALP with Bacitracin 0.2 mg/ml
+0.2
-0.2
N.D.
N.D.
+0.2
carbon source
propionate (C)
+0.2
-0.2
N.D.
N.D.
+0.2
stress
ALP with nitrite 0.15 mM
+0.2
-0.2
N.D.
N.D.
+0.2
stress
ALP with Fusidic 0.02 mg/ml
+0.4
-0.2
N.D.
N.D.
+0.1
stress
ALP with Nickel (II) chloride 2.5 mM
+0.2
-0.3
N.D.
N.D.
+0.4
carbon source
L-Lactate (C)
+0.2
-0.1
N.D.
N.D.
+0.3
stress
ALP with Cisplatin 0.0008 mg/ml
+0.3
-0.2
N.D.
N.D.
+0.3
stress
ALP with Fusidic 0.01 mg/ml
+0.5
-0.3
N.D.
N.D.
+0.1
stress
ALP with Thallium(I) acetate 0.002 mg/ml
+0.3
-0.2
N.D.
N.D.
+0.2
stress
ALP with Chloride 75 mM
+0.3
-0.1
N.D.
N.D.
+0.2
stress
ALP with nitrate 75 mM
+0.3
-0.1
N.D.
N.D.
+0.2
stress
ALP with nitrate 50 mM
+0.3
-0.2
N.D.
N.D.
+0.3
stress
ALP with Thallium(I) acetate 0.003 mg/ml
+0.2
-0.1
N.D.
N.D.
+0.2
stress
ALP with Dimethyl Sulfoxide 2 vol%
+0.3
-0.1
N.D.
N.D.
+0.3
stress
ALP with Fusidic 0.007 mg/ml
+0.5
-0.1
N.D.
N.D.
+0.1
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.2
+0.1
N.D.
N.D.
+0.2
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.2
+0.2
N.D.
N.D.
+0.2
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
+0.2
+0.1
N.D.
N.D.
+0.3
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.3
+0.1
N.D.
N.D.
+0.2
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
+0.3
+0.1
N.D.
N.D.
+0.2
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
+0.2
+0.2
N.D.
N.D.
+0.2
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.2
+0.2
N.D.
N.D.
+0.2
stress
ALP with Cisplatin 0.0009 mg/ml
+0.5
-0.2
N.D.
N.D.
+0.4
stress
ALP with Cisplatin 0.0007 mg/ml
+0.5
-0.2
N.D.
N.D.
+0.5
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