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Fitness for 5 genes in
Dechlorosoma suillum PS
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_0810 and Dsui_0811 overlap by 4 nucleotides
Dsui_0811 and Dsui_0812 overlap by 41 nucleotides
Dsui_0812 and Dsui_0813 are separated by 173 nucleotides
Dsui_0813 and Dsui_0814 overlap by 1 nucleotides
Dsui_0810: Dsui_0810 - signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation, at 820,666 to 822,786
_0810
Dsui_0811: Dsui_0811 - hypothetical protein, at 822,783 to 823,391
_0811
Dsui_0812: Dsui_0812 - ribosomal RNA small subunit methyltransferase RsmB, at 823,351 to 824,688
_0812
Dsui_0813: Dsui_0813 - cation diffusion facilitator family transporter, at 824,862 to 825,764
_0813
Dsui_0814: Dsui_0814 - S1/P1 Nuclease, at 825,764 to 826,687
_0814
Group
Condition
Dsui
_0810
Dsui
_0811
Dsui
_0812
Dsui
_0813
Dsui
_0814
stress
ALP with Fusidic 0.007 mg/ml
-3.2
-4.0
-2.1
+0.5
+0.5
stress
ALP with Fusidic 0.02 mg/ml
-3.4
-3.6
-2.0
+0.5
+0.4
stress
ALP with Fusidic 0.01 mg/ml
-2.9
-3.9
-2.1
+0.5
+0.5
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-3.9
-3.1
-0.1
+0.2
+0.2
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-3.8
-3.2
+0.0
+0.2
+0.2
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-4.0
-3.1
-0.0
+0.3
+0.3
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-4.1
-2.9
+0.1
+0.2
+0.2
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-4.1
-2.8
-0.1
+0.3
+0.1
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-3.9
-2.7
+0.0
+0.2
+0.2
No stressor control+ 10 mM ClO4 and 20 mM lactate
-3.6
-2.6
+0.1
+0.3
+0.2
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-3.5
-2.7
+0.3
+0.3
+0.2
No stressor control+ 10 mM ClO4 and 20 mM lactate
-3.3
-2.6
+0.0
+0.3
+0.3
No stressor control+ 10 mM ClO4 and 20 mM lactate
-3.3
-2.6
+0.1
+0.3
+0.3
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-3.2
-2.3
-0.0
+0.3
+0.3
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
-2.0
-0.8
-0.6
-0.0
-0.2
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
-2.2
-1.5
+0.0
+0.1
+0.2
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
-2.2
-1.7
+0.2
+0.3
+0.3
anaerobic
anaerobic ALP with 3 all (C)s and 5mM perchlorate
-1.4
-1.0
-0.3
-0.3
-0.1
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-1.4
-1.1
-0.6
+0.0
+0.1
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-1.3
-1.0
-0.6
+0.0
-0.1
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-1.2
-1.1
-0.7
+0.1
-0.0
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-1.2
-1.1
-0.4
-0.0
+0.1
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-1.1
-1.0
-0.5
+0.1
+0.1
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-1.1
-1.0
-0.4
+0.0
+0.2
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-0.7
-1.0
-0.2
-0.2
-0.2
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-1.1
-1.0
-0.4
+0.0
+0.2
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-0.6
-1.4
-0.2
+0.1
-0.1
anaerobic
Anaero. lactate (C), nitrate electron acceptor
-0.7
-1.5
-0.1
+0.0
+0.1
carbon source
defined media with 30 mM sodium lactate
-0.8
-0.9
-0.4
+0.0
+0.0
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-1.0
-1.1
-0.2
+0.1
+0.1
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