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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_0747 and Dsui_0748 are separated by 173 nucleotides
Dsui_0748 and Dsui_0749 overlap by 4 nucleotides
Dsui_0749 and Dsui_0750 are separated by 23 nucleotides
Dsui_0750 and Dsui_0751 are separated by 1 nucleotides
Dsui_0747: Dsui_0747 - glutamate--cysteine ligase, at 744,850 to 746,130
_0747
Dsui_0748: Dsui_0748 - ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component, at 746,304 to 747,302
_0748
Dsui_0749: Dsui_0749 - PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein, at 747,299 to 750,160
_0749
Dsui_0750: Dsui_0750 - hypothetical protein, at 750,184 to 750,516
_0750
Dsui_0751: Dsui_0751 - Eco57I restriction endonuclease, at 750,518 to 751,729
_0751
Group
Condition
Dsui
_0747
Dsui
_0748
Dsui
_0749
Dsui
_0750
Dsui
_0751
stress
ALP with Cisplatin 0.0008 mg/ml
-3.1
-0.2
-0.1
-0.2
-1.5
stress
ALP with Cisplatin 0.0009 mg/ml
-2.6
+0.1
-0.2
-0.3
-1.7
stress
ALP with copper (II) chloride 0.6 mM
-1.4
+0.0
-0.4
-0.2
-2.2
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-1.6
+0.3
+0.6
-0.1
-3.4
stress
ALP with Cisplatin 0.0007 mg/ml
-2.2
+0.1
-0.1
-0.4
-1.4
carbon source
defined media with 40 mM sodium acetate
-2.8
-0.4
+0.0
-0.3
+0.1
carbon source
D,L-Lactate (C)
-1.7
-0.1
-0.3
-0.7
-0.4
stress
ALP with Zinc 2 mM
-1.0
-0.3
-0.4
-0.7
-0.9
carbon source
L-Lactate (C)
-1.7
-0.3
-0.2
-0.4
-0.5
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-1.5
+0.3
+0.8
+0.2
-2.8
stress
ALP with Cobalt chloride 0.25 mM
-1.6
+0.2
-0.1
-0.0
-1.0
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-2.1
+0.2
+0.2
-0.0
-0.6
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-1.7
+0.4
+0.6
-0.3
-1.1
No stressor control+ 10 mM ClO4 and 20 mM lactate
-1.2
+0.5
+0.8
+0.1
-2.3
No stressor control+ 10 mM ClO4 and 20 mM lactate
-1.0
+0.4
+0.8
+0.2
-2.0
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.9
+0.5
+0.8
+0.1
-2.0
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-1.3
+0.5
+0.8
+0.2
-1.8
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-1.2
+0.4
+0.7
+0.2
-1.4
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.7
+0.6
+0.8
-0.2
-1.7
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.9
+0.5
+0.7
+0.4
-1.7
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.8
+0.6
+0.8
+0.0
-1.6
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-2.0
+0.3
+0.6
+0.3
-0.1
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
-1.0
+0.6
+0.8
+0.1
-0.9
stress
ALP with Fusidic 0.01 mg/ml
+2.9
+0.0
-0.2
-0.1
+0.3
stress
ALP with Fusidic 0.007 mg/ml
+2.8
-0.0
-0.1
+0.4
+0.3
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
+2.6
+0.8
+1.1
-0.6
+0.7
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
+2.6
+0.8
+1.1
-0.2
+0.6
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
+2.4
+0.7
+1.1
+0.4
+0.8
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
+2.6
+0.9
+1.1
+0.1
+0.6
stress
ALP with perchlorate 12 mM
+5.9
+0.1
+0.0
+0.1
-0.0
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