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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_0685 and Dsui_0686 are separated by 8 nucleotides
Dsui_0686 and Dsui_0687 overlap by 17 nucleotides
Dsui_0687 and Dsui_0688 are separated by 95 nucleotides
Dsui_0688 and Dsui_0689 overlap by 1 nucleotides
Dsui_0685: Dsui_0685 - glutathione S-transferase, at 683,373 to 684,008
_0685
Dsui_0686: Dsui_0686 - tRNA nucleotidyltransferase/poly(A) polymerase, at 684,017 to 685,237
_0686
Dsui_0687: Dsui_0687 - Protein of unknown function (DUF2905), at 685,221 to 685,412
_0687
Dsui_0688: Dsui_0688 - glutathione S-transferase, at 685,508 to 686,125
_0688
Dsui_0689: Dsui_0689 - lysophospholipase, at 686,125 to 686,937
_0689
Group
Condition
Dsui
_0685
Dsui
_0686
Dsui
_0687
Dsui
_0688
Dsui
_0689
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-2.1
N.D.
-2.2
-0.1
+0.1
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-2.4
N.D.
-0.0
-0.2
-0.4
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-2.7
N.D.
-0.2
+0.1
-0.1
carbon source
a-Ketoglutaric (C)
-0.4
N.D.
-1.0
-0.4
-1.0
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
-1.7
N.D.
+0.1
-0.1
-1.1
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-1.9
N.D.
+0.1
-0.2
-0.7
stress
ALP with Cisplatin 0.0008 mg/ml
-0.8
N.D.
-0.2
-0.6
-1.1
stress
rich media with sodium chlorite 0.16 mM
-1.3
N.D.
-0.7
-0.2
-0.3
carbon source
D,L-Lactate (C)
-0.2
N.D.
-0.8
-0.8
-0.7
stress
ALP with Cisplatin 0.0007 mg/ml
-1.1
N.D.
-0.5
-0.5
-0.4
stress
ALP with Bacitracin 0.2 mg/ml
-0.7
N.D.
-0.5
-0.4
-0.7
alp richb
ALP
-0.5
N.D.
-0.3
-0.7
-1.0
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-1.7
N.D.
-0.1
-0.2
-0.4
No stressor control+ 10 mM ClO4 and 20 mM lactate
-1.6
N.D.
+0.1
-0.3
-0.5
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-2.2
N.D.
+0.4
-0.1
-0.4
stress
ALP with Nickel (II) chloride 1.5 mM
-0.5
N.D.
-0.5
-1.0
-0.3
alp rich
rich media
-1.4
N.D.
-0.5
-0.1
-0.3
carbon source
D,L-Lactate (C)
-0.3
N.D.
-0.5
-0.7
-0.6
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-1.3
N.D.
+0.1
-0.2
-0.8
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-1.8
N.D.
+0.3
-0.2
-0.5
carbon source
pyruvate (C)
-0.5
N.D.
-0.3
-0.8
-0.6
carbon source
pyruvate (C)
-0.2
N.D.
-0.3
-0.7
-0.9
carbon source
D-Lactate (C)
+0.1
N.D.
-0.7
-0.6
-0.7
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-2.4
N.D.
+0.4
+0.1
+0.1
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-1.4
N.D.
+0.2
-0.2
-0.4
anaerobic
Anaero. lactate (C), nitrate electron acceptor
-1.9
N.D.
-0.2
+0.2
+0.4
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-2.0
N.D.
+0.7
+0.1
+0.2
stress
rich media with sodium chlorite 0.16 mM
-1.5
N.D.
+0.7
-0.1
+0.3
stress
ALP with Nickel (II) chloride 2.5 mM
-0.4
N.D.
+0.9
-0.6
+0.3
stress
ALP with copper (II) chloride 0.6 mM
-0.6
N.D.
+0.6
-0.2
+0.7
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